RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ARPC4-TTLL3A0A0A6YYG9 625 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 A0A0U1RQK1 487 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 CENPVL1A0A0U1RR11 272 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 CENPVL3A0A0U1RRI6 287 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MAGEB16A2A368 324 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ANKDD1BA6NHY2 528 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 AGAP5A6NIR3 686 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 C17orf100A8MU93 164 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 EIF3HO15372 352 aaKnown RBP eCLIP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 DEDDO75618 318 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 SEC31AO94979 1220 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 VAPBO95292 243 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 H6PDO95479 791 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ANGPTL1O95841 491 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 LY6G6CO95867 125 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 WNT11O96014 354 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TGFB1P01137 390 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 OPN1SWP03999 348 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 S100BP04271 92 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 IFNW1P05000 195 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ATP1B1P05026 303 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF35P13682 527 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MMP9P14780 707 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ELK4P28324 431 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MPGP29372 298 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 IL12BP29460 328 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PHBP35232 272 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 BSGP35613 385 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 GDF5P43026 501 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 SSR2P43308 183 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MAGEA3P43357 314 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 XKP51811 444 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PGGT1BP53609 377 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 SLC16A1P53985 500 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ETF1P62495 437 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MRPS35P82673 323 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 CAV1Q03135 178 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TGM3Q08188 693 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 C2orf54Q08AI8 447 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 C17orf67Q0P5P2 114 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 RAB39AQ14964 217 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 HEPACAMQ14CZ8 416 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PDK3Q15120 406 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TRADDQ15628 312 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 WHAMMP3Q1A5X7 153 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 AP5B1Q2VPB7 878 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 HFEQ30201 348 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TMEM176BQ3YBM2 270 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 MMEL1Q495T6 779 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ATP6AP1LQ52LC2 224 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TMEM35AQ53FP2 167 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TMEM255AQ5JRV8 349 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PDSS1Q5T2R2 415 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 RNASEH2BQ5TBB1 312 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 OR4C11Q6IEV9 310 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 KRT80Q6KB66 452 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 FAM45BPQ6NSW5 357 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TTC27Q6P3X3 843 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 C11orf88Q6PI97 169 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PAQR3Q6TCH7 311 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ETV3LQ6ZN32 361 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 IKBIPQ70UQ0 350 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 LINGO2Q7L985 606 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 LSRQ86X29 649 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ZBED8Q8IZ13 594 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF101Q8IZC7 436 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 SRFBP1Q8NEF9 429 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 FBXO27Q8NI29 283 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 FAM45AQ8TCE6 357 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ST7LQ8TDW4 575 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ACTRT2Q8TDY3 377 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TFAP2CQ92754 450 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 BCL2L2Q92843 193 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TSPAN17Q96FV3 270 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 CERS2Q96G23 380 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 REXO5Q96IC2 774 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF75AQ96N20 296 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF681Q96N22 645 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TSPAN32Q96QS1 320 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 KCNS3Q9BQ31 491 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TM2D3Q9BRN9 247 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 KIFC1Q9BW19 673 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 PITHD1Q9GZP4 211 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 DPH5Q9H2P9 285 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 OR51B5Q9H339 312 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 DDX31Q9H8H2 851 aaKnown RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TIGARQ9NQ88 270 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 FBXO6Q9NRD1 293 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 ACOXLQ9NUZ1 547 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 NKIRAS2Q9NYR9 191 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 TAS2R13Q9NYV9 303 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 UBAP1Q9NZ09 502 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.75□□□□□ -1.97
TCOF1-208ENST00000506063 IL20RAQ9UHF4 553 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 BCAP29Q9UHQ4 241 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 CFL2Q9Y281 166 aa2.75□□□□□ -1.97
TCOF1-208ENST00000506063 NOSIPQ9Y314 301 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms