RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 HS3ST1O14792 307 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF208O43345 1280 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 LYZL6O75951 148 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 CNOT4O95628 575 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 THBS1P07996 1170 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 TFPTP0C1Z6 253 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 COX5AP20674 150 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 IGHV1-2P23083 117 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 EDNRAP25101 427 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 MRPL19P49406 292 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 MAP2K6P52564 334 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 OR2B6P58173 313 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 SLC35A1P78382 337 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 LARS2Q15031 903 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 RGNQ15493 299 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 STK11Q15831 433 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 TTMPQ5BVD1 217 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 Q5PR19 223 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 NCMAPQ5T1S8 102 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 RNF220Q5VTB9 566 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 SLC2A7Q6PXP3 512 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF836Q6ZNA1 936 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 CCDC103Q8IW40 242 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 UBE2J2Q8N2K1 259 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF611Q8N823 705 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 OR52P1PQ8NH57 321 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 SLC38A5Q8WUX1 472 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 TMEM171Q8WVE6 324 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 DYDC1Q8WWB3 177 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 AKAP1Q92667 903 aaKnown RBP eCLIP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 PERPQ96FX8 193 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 TMEM19Q96HH6 336 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 C18orf12Q96KH6 178 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 EBF4Q9BQW3 602 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 NAA11Q9BSU3 229 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 PAIP1Q9H074 479 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 RAD21L1Q9H4I0 556 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ARMC7Q9H6L4 198 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ESRP2Q9H6T0 727 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 CACYBPQ9HB71 228 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 TRAPPC4Q9Y296 219 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF443Q9Y2A4 671 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 RNF115Q9Y4L5 304 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 PCDHB14Q9Y5E9 798 aa7.5□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF469Q96JG9 3925 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HEATR1Q9H583 2144 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 A0A0G2JPF8 293 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ZC3H12DA2A288 527 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HNRNPCL2B2RXH8 293 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HNRNPCL3B7ZW38 293 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 NR5A2O00482 541 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CLOCKO15516 846 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 EIF1BO60739 113 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HNRNPCL1O60812 293 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 RAMP1O60894 148 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 TMCC2O75069 709 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 MRPL33O75394 65 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 IGHV3-9P01782 118 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CD3EP07766 207 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 GKN3PP0CG01 181 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HNRNPCL4P0DMR1 293 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 IMPDH2P12268 514 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 HOXB9P17482 250 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 GGT1P19440 569 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CXCR1P25024 350 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ADSLP30566 484 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ACAA2P42765 397 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 PTH2RP49190 550 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 IDH3AP50213 366 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 SLC16A1P53985 500 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 COPZ1P61923 177 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 H3F3AP84243 136 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 FADDQ13158 208 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 PPA1Q15181 289 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ZSWIM7Q19AV6 140 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 TIMM23BQ5SRD1 257 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 FBXW9Q5XUX1 488 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ADAM5Q6NVV9 412 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 PRSS57Q6UWY2 283 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 YTHDF3Q7Z739 585 aaKnown RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CLIP4Q8N3C7 705 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CADM2Q8N3J6 435 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 IGFBPL1Q8WX77 278 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 FBXW5Q969U6 566 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 APH1AQ96BI3 265 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 MUCL1Q96DR8 90 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 SPDL1Q96EA4 605 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 Q96MF0 132 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CCDC28BQ9BUN5 200 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 SPATA9Q9BWV2 254 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 ADAM19Q9H013 955 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 GSX1Q9H4S2 264 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CXorf56Q9H5V9 222 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 A4GALTQ9NPC4 353 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 CCDC167Q9P0B6 97 aa7.49□□□□□ -1.21
HMGXB4-207ENST00000498212 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms