RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CDKN1AP38936 164 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 POLR2HP52434 150 aaKnown RBP10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 MAP2K6P52564 334 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC16A1P53985 500 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 CDH11P55287 796 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 UFM1P61960 85 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC35A1P78382 337 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 BST1Q10588 318 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 SYPL1Q16563 259 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 TMEM108Q6UXF1 575 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 ATG4DQ86TL0 474 aaPredicted RBP10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 ARL5BQ96KC2 179 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 HS6ST2Q96MM7 605 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 NAA11Q9BSU3 229 aaPredicted RBP10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 OR11A1Q9GZK7 315 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 MTHFD2LQ9H903 347 aaPredicted RBP10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 BARX1Q9HBU1 254 aaPredicted RBP10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 AIG1Q9NVV5 245 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 TMEM181Q9P2C4 612 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 MGAT4BQ9UQ53 548 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 TMED7Q9Y3B3 224 aa10.38□□□□□ -0.75
NUDCD3-211ENST00000497978 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 FN1P02751 2386 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 CLDN24A6NM45 220 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ZNF716A6NP11 495 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 SDHDO14521 159 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ABCD4O14678 606 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 HDAC3O15379 428 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ZNF208O43345 1280 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 RAMP1O60894 148 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 KRT75O95678 551 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 DBIP07108 87 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ALDOCP09972 364 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 MPP2Q14168 576 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 PGGHGQ32M88 737 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 TNFAIP8L3Q5GJ75 292 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 AGAP6Q5VW22 663 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 OR7E24Q6IFN5 339 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 CCDC103Q8IW40 242 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 PEX5LQ8IYB4 626 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ZNF440Q8IYI8 595 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 DEPDC4Q8N2C3 294 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 ANKRD42Q8N9B4 389 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 GLB1L3Q8NCI6 653 aaPredicted RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 CNOT9Q92600 299 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 DNAJA3Q96EY1 480 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 TEX37Q96LM6 180 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 INPP5KQ9BT40 448 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 TRAF4Q9BUZ4 470 aaPredicted RBP10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC38A1Q9H2H9 487 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 THAP1Q9NVV9 213 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 PARPBPQ9NWS1 579 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 TAS2R16Q9NYV7 291 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 UPB1Q9UBR1 384 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 OSGIN1Q9UJX0 560 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 POU2F3Q9UKI9 436 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC9A8Q9Y2E8 581 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
NUDCD3-211ENST00000497978 GOLGA8QA0A0J9YX86 632 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 PRAMEF27A3QJZ7 478 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 GOLGA8OA6NCC3 632 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 CFAP73A6NFT4 308 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 SHISA9B4DS77 424 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 GOLGA8NF8WBI6 632 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 SLCO1B7G3V0H7 640 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 FAAHO00519 579 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 RFXANKO14593 260 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 AP3D1O14617 1153 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 TP53P04637 393 aaPredicted RBP10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 IL6P05231 212 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 GSNP06396 782 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 CHRM4P08173 479 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 IDO1P14902 403 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 PTAFRP25105 342 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 EPHA3P29320 983 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 TACR3P29371 465 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 ACVR1BP36896 505 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC1A3P43003 542 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 DMTNQ08495 405 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 NRF1Q16656 503 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 GSTA3Q16772 222 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 MRPL2Q5T653 305 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 ATG16L1Q676U5 607 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 NXNQ6DKJ4 435 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 SLC22A25Q6T423 547 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 CASP12Q6UXS9 341 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 DTX2Q86UW9 622 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 OR52N5Q8NH56 324 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 PNPT1Q8TCS8 783 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 ADAD1Q96M93 576 aaKnown RBP10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 REG4Q9BYZ8 158 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 SLCO5A1Q9H2Y9 848 aa10.36□□□□□ -0.75
NUDCD3-211ENST00000497978 WDR55Q9H6Y2 383 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms