RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 IGHV4-30-2A0A087WSY4 118 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 ITGA5P08648 1049 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 CCNA2P20248 432 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 HTR3AP46098 478 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 IDH2P48735 452 aaKnown RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 CLNS1AP54105 237 aaKnown RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 FOXG1P55316 489 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 GABRA6Q16445 453 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 OR7E24Q6IFN5 339 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 HMBOX1Q6NT76 420 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 CNOT9Q92600 299 aaKnown RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 MUS81Q96NY9 551 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 TMEM109Q9BVC6 243 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 C20orf27Q9GZN8 174 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 TRAPPC4Q9Y296 219 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-203ENST00000494993 STAB1Q9NY15 2570 aa19.41■□□□□ 0.7
HDDC3-203ENST00000494993 A0A096LNT2 108 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 TMED7-TICAM2A0A0A6YYA0 188 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 M0R1B8 84 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 HMGN4O00479 90 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 RPL14P50914 215 aaKnown RBP19.4■□□□□ 0.7
HDDC3-203ENST00000494993 H3F3AP84243 136 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 PODNL1Q6PEZ8 512 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 CLEC2AQ6UVW9 174 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 CASP12Q6UXS9 341 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 B3GLCTQ6Y288 498 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 LRRC34Q8IZ02 419 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 FBXL14Q8N1E6 418 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 MUC15Q8N387 334 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 OR10H5Q8NGA6 315 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 OR52E4Q8NGH9 312 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 SORT1Q99523 831 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 REPIN1Q9BWE0 567 aaKnown RBP19.4■□□□□ 0.7
HDDC3-203ENST00000494993 AMBRA1Q9C0C7 1298 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 TMED7Q9Y3B3 224 aa19.4■□□□□ 0.7
HDDC3-203ENST00000494993 A8MV72 311 aaPredicted RBP19.39■□□□□ 0.69
HDDC3-203ENST00000494993 E9PBE3 544 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 PDLIM1O00151 329 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 AP3D1O14617 1153 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 BIRC5O15392 142 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 SNUPNO95149 360 aaKnown RBP19.39■□□□□ 0.69
HDDC3-203ENST00000494993 C1QCP02747 245 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 LBPP18428 481 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 FABP6P51161 128 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 POLR2HP52434 150 aaKnown RBP19.39■□□□□ 0.69
HDDC3-203ENST00000494993 SLC35A1P78382 337 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 FAM174BQ3ZCQ3 159 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 CMIPQ8IY22 773 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 DEPDC4Q8N2C3 294 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 DDIT4LQ96D03 193 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 CCDC115Q96NT0 180 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 NUF2Q9BZD4 464 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 SLC38A1Q9H2H9 487 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 BTNL2Q9UIR0 455 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 DCTN4Q9UJW0 460 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 OSGIN1Q9UJX0 560 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 SLC9A8Q9Y2E8 581 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 FLVCR1Q9Y5Y0 555 aa19.39■□□□□ 0.69
HDDC3-203ENST00000494993 TMEM72A0PK05 275 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 FAM234BA2RU67 622 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 ZNF208O43345 1280 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 GPRIN2O60269 458 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 EIF1BO60739 113 aaKnown RBP19.38■□□□□ 0.69
HDDC3-203ENST00000494993 IFNA2P01563 188 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 IMPDH2P12268 514 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 S100A3P33764 101 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 SLC1A6P48664 564 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 DSCR9P59020 149 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 RAB35Q15286 201 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 SYPL1Q16563 259 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 LSRQ86X29 649 aaPredicted RBP19.38■□□□□ 0.69
HDDC3-203ENST00000494993 RNF130Q86XS8 419 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 KIRREL3Q8IZU9 778 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 ANKFN1Q8N957 763 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 WDR31Q8NA23 367 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 PMM1Q92871 262 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 TRNT1Q96Q11 434 aaKnown RBP19.38■□□□□ 0.69
HDDC3-203ENST00000494993 NAA11Q9BSU3 229 aaPredicted RBP19.38■□□□□ 0.69
HDDC3-203ENST00000494993 INPP5KQ9BT40 448 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 C1QTNF6Q9BXI9 259 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 PARPBPQ9NWS1 579 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 UPB1Q9UBR1 384 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 HAO1Q9UJM8 370 aa19.38■□□□□ 0.69
HDDC3-203ENST00000494993 AGAP5A6NIR3 686 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 CHRM4P08173 479 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 TACR3P29371 465 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 SLC17A1Q14916 467 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 KRT71Q3SY84 523 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 CHRFAM7AQ494W8 412 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 C9orf135Q5VTT2 229 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 ZNF544Q6NX49 715 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 C17orf78Q8N4C9 275 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 C1orf162Q8NEQ5 155 aaPredicted RBP19.37■□□□□ 0.69
HDDC3-203ENST00000494993 WDR60Q8WVS4 1066 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 HTRA1Q92743 480 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 SSU72Q9NP77 194 aaKnown RBP19.37■□□□□ 0.69
HDDC3-203ENST00000494993 SLC17A5Q9NRA2 495 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 SLC7A10Q9NS82 523 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms