RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TMEM247A6NEH6 219 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 RAMP1O60894 148 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 PRG2P13727 222 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 H2AFXP16104 143 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 HOXB9P17482 250 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 CXCR1P25024 350 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 NR1H2P55055 460 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 LARS2Q15031 903 aaKnown RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 TAB1Q15750 504 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 ZSWIM7Q19AV6 140 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 LIN52Q52LA3 116 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 AGKQ53H12 422 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 PAGE3Q5JUK9 113 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 BHLHA15Q7RTS1 189 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 MAL2Q969L2 176 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 SPDL1Q96EA4 605 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 USB1Q9BQ65 265 aaKnown RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 TMEM204Q9BSN7 226 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 POTEKPQ9BYX7 375 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 ZNF443Q9Y2A4 671 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 NOSIPQ9Y314 301 aaKnown RBP13.81□□□□□ -0.2
LIMS2-216ENST00000494613 IFT52Q9Y366 437 aa13.81□□□□□ -0.2
LIMS2-216ENST00000494613 DNPH1O43598 174 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 EIF1BO60739 113 aaKnown RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 SMPD2O60906 423 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 LYZL6O75951 148 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 PGM3O95394 542 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 CNOT4O95628 575 aaKnown RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 THBS1P07996 1170 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 BMP2P12643 396 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 UQCRBP14927 111 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 IGHV1-2P23083 117 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 SLC35A1P78382 337 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 ZNF311Q5JNZ3 666 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 LRIF1Q5T3J3 769 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 FBXW9Q5XUX1 488 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 ABLIM2Q6H8Q1 611 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 WBP2NLQ6ICG8 309 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 ZNF704Q6ZNC4 412 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 MSRB3Q8IXL7 192 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 PIGXQ8TBF5 258 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 THOC1Q96FV9 657 aaKnown RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 MAGEB18Q96M61 343 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 NAA11Q9BSU3 229 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 RSPO3Q9BXY4 272 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-216ENST00000494613 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 A4GALTQ9NPC4 353 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 DLL4Q9NR61 685 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
LIMS2-216ENST00000494613 NR5A2O00482 541 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 GPR171O14626 319 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 ARHGEF9O43307 516 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
LIMS2-216ENST00000494613 IGHV3-9P01782 118 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 FOSL1P15407 271 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 SLC16A1P53985 500 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 RIPPLY3P57055 190 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 COPZ1P61923 177 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 BNIP2Q12982 314 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 FADDQ13158 208 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
LIMS2-216ENST00000494613 NCMAPQ5T1S8 102 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 PRAMEF8Q5VWM4 474 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 PRAMEF7Q5VXH5 474 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 C20orf204Q6ZNR8 217 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 KRTAP1-3Q8IUG1 177 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 P3H2Q8IVL5 708 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 UBE2J2Q8N2K1 259 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 CADM2Q8N3J6 435 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 ZNF433Q8N7K0 673 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-216ENST00000494613 LILRB1Q8NHL6 650 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-216ENST00000494613 CCL19Q99731 98 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 NGBQ9NPG2 151 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-216ENST00000494613 VAPAQ9P0L0 249 aa13.79□□□□□ -0.2
LIMS2-216ENST00000494613 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 NCF2P19878 526 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-216ENST00000494613 ATP4BP51164 291 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-216ENST00000494613 HOXC5Q00444 222 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 RNF220Q5VTB9 566 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 SERPINA11Q86U17 422 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 C10orf111Q8N326 155 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 TMEM99Q8N816 258 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 IGFBPL1Q8WX77 278 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
LIMS2-216ENST00000494613 GSX1Q9H4S2 264 aaPredicted RBP13.78□□□□□ -0.2
LIMS2-216ENST00000494613 CACYBPQ9HB71 228 aaKnown RBP13.78□□□□□ -0.2
LIMS2-216ENST00000494613 PARPBPQ9NWS1 579 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 ROS1P08922 2347 aa13.78□□□□□ -0.2
LIMS2-216ENST00000494613 A0A1W2PP18 115 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms