RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 EDF1O60869 148 aaKnown RBP29.45■■■□□ 2.31
CBX4-203ENST00000494546 CD53P19397 219 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 EDNRAP25101 427 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 LOXP28300 417 aaPredicted RBP29.45■■■□□ 2.31
CBX4-203ENST00000494546 COPZ1P61923 177 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 ZSWIM7Q19AV6 140 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 ZNF311Q5JNZ3 666 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 GCNT6Q5T4J0 391 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 BBS10Q8TAM1 723 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 PIGXQ8TBF5 258 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 KISS1RQ969F8 398 aaPredicted RBP29.45■■■□□ 2.31
CBX4-203ENST00000494546 TRAPPC4Q9Y296 219 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 CHST2Q9Y4C5 530 aa29.45■■■□□ 2.31
CBX4-203ENST00000494546 HIVEP1P15822 2718 aa29.45■■■□□ 2.3
CBX4-203ENST00000494546 PRRC2AP48634 2157 aaKnown RBP29.45■■■□□ 2.3
CBX4-203ENST00000494546 DNPH1O43598 174 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 PRG2P13727 222 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 PPIBP23284 216 aaKnown RBP29.44■■■□□ 2.3
CBX4-203ENST00000494546 CXCR1P25024 350 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 P2RY6Q15077 328 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 PDK3Q15120 406 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 PRAMEF8Q5VWM4 474 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 PRAMEF7Q5VXH5 474 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 WBP2NLQ6ICG8 309 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 Q6ZT83 130 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 CCDC103Q8IW40 242 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 STON2Q8WXE9 905 aa29.44■■■□□ 2.3
CBX4-203ENST00000494546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP29.44■■■□□ 2.3
CBX4-203ENST00000494546 IGKV3D-15A0A087WSY6 115 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 A0A1W2PP18 115 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 ZC3H12DA2A288 527 aaKnown RBP29.43■■■□□ 2.3
CBX4-203ENST00000494546 ZNF716A6NP11 495 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 PGM3O95394 542 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 IMPDH2P12268 514 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 MAP2K6P52564 334 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 SLC35A1P78382 337 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 ITGADQ13349 1161 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 SERPINA11Q86U17 422 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 C10orf111Q8N326 155 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 NFKBIDQ8NI38 313 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 TRIM33Q9UPN9 1127 aa29.43■■■□□ 2.3
CBX4-203ENST00000494546 NOSIPQ9Y314 301 aaKnown RBP29.43■■■□□ 2.3
CBX4-203ENST00000494546 A0A0G2JND7 137 aa29.42■■■□□ 2.3
CBX4-203ENST00000494546 RAMP1O60894 148 aa29.42■■■□□ 2.3
CBX4-203ENST00000494546 PLPPR2Q96GM1 343 aa29.42■■■□□ 2.3
CBX4-203ENST00000494546 TRBV5-3A0A0A0MS03 114 aa29.41■■■□□ 2.3
CBX4-203ENST00000494546 ARAFP10398 606 aa29.41■■■□□ 2.3
CBX4-203ENST00000494546 FPR1P21462 350 aa29.41■■■□□ 2.3
CBX4-203ENST00000494546 ACKR1Q16570 336 aa29.41■■■□□ 2.3
CBX4-203ENST00000494546 BHLHA15Q7RTS1 189 aaPredicted RBP29.41■■■□□ 2.3
CBX4-203ENST00000494546 IKZF5Q9H5V7 419 aa29.41■■■□□ 2.3
CBX4-203ENST00000494546 FREM1Q5H8C1 2179 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 EVPLLA8MZ36 301 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 FRS3O43559 492 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 EIF1BO60739 113 aaKnown RBP29.4■■■□□ 2.3
CBX4-203ENST00000494546 LYZL6O75951 148 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 NR1H2P55055 460 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 H3F3AP84243 136 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 BNIP2Q12982 314 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 TGIF2LYQ8IUE0 185 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 SIKE1Q9BRV8 207 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 NAA11Q9BSU3 229 aaPredicted RBP29.4■■■□□ 2.3
CBX4-203ENST00000494546 BEX4Q9NWD9 120 aaPredicted RBP29.4■■■□□ 2.3
CBX4-203ENST00000494546 LEF1Q9UJU2 399 aaPredicted RBP29.4■■■□□ 2.3
CBX4-203ENST00000494546 PRDM4Q9UKN5 801 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 CORO2BQ9UQ03 480 aa29.4■■■□□ 2.3
CBX4-203ENST00000494546 GPR171O14626 319 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 ETS2P15036 469 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 IDUAP35475 653 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 HOXC5Q00444 222 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 CDK6Q00534 326 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 TAB1Q15750 504 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 UBE2J2Q8N2K1 259 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 APH1AQ96BI3 265 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 POTEKPQ9BYX7 375 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 ZNF385DQ9H6B1 395 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 NDUFAF1Q9Y375 327 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 GMEB1Q9Y692 573 aa29.39■■■□□ 2.3
CBX4-203ENST00000494546 IGHV3-9P01782 118 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 CD99P14209 185 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 SLC16A1P53985 500 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 CEACAM7Q14002 265 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 CAPRIN1Q14444 709 aaKnown RBP29.38■■■□□ 2.29
CBX4-203ENST00000494546 REEP3Q6NUK4 255 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 DLEU7Q6UYE1 221 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 HSD17B8Q92506 261 aa29.38■■■□□ 2.29
CBX4-203ENST00000494546 MED13LQ71F56 2210 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 ANGPT2O15123 496 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 GPIP06744 558 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 GPX2P18283 190 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 IGHV1-2P23083 117 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 OR7A5Q15622 319 aa29.37■■■□□ 2.29
CBX4-203ENST00000494546 ZNF704Q6ZNC4 412 aaPredicted RBP29.37■■■□□ 2.29
CBX4-203ENST00000494546 CPPED1Q9BRF8 314 aaPredicted RBP29.37■■■□□ 2.29
CBX4-203ENST00000494546 MRPL33O75394 65 aaKnown RBP29.36■■■□□ 2.29
CBX4-203ENST00000494546 CNOT4O95628 575 aaKnown RBP29.36■■■□□ 2.29
CBX4-203ENST00000494546 PLAUP00749 431 aa29.36■■■□□ 2.29
CBX4-203ENST00000494546 ADSLP30566 484 aaPredicted RBP29.36■■■□□ 2.29
CBX4-203ENST00000494546 ADAM8P78325 824 aa29.36■■■□□ 2.29
CBX4-203ENST00000494546 SCARB2Q14108 478 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms