RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ARHGAP21Q5T5U3 1957 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 OR14I1A6ND48 311 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 G3V3Y1 287 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 M0R3H8 397 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 FADS1O60427 444 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 TPST1O60507 370 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 ENTPD5O75356 428 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 ANGPTL1O95841 491 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 IFNW1P05000 195 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CCL3P10147 92 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 TNFRSF1BP20333 461 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 RFC3P40938 356 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 EEF1A1P68104 462 aaKnown RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CD226Q15762 336 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 GLIPR1L2Q4G1C9 344 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 MEX3BQ6ZN04 569 aaKnown RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 DEF8Q6ZN54 512 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF550Q7Z398 422 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 RANBP3LQ86VV4 465 aaPredicted RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CARM1Q86X55 608 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 ADGRG5Q8IZF4 528 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CLIP4Q8N3C7 705 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 FAM86B1Q8N7N1 296 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 OR2M7Q8NG81 312 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 PAQR8Q8TEZ7 354 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CANT1Q8WVQ1 401 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 PYDC1Q8WXC3 89 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 DTNBP1Q96EV8 351 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 FAM173AQ9BQD7 235 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 MAGIXQ9H6Y5 334 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 YY1AP1Q9H869 796 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 GALNT9Q9HCQ5 603 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 RLIMQ9NVW2 624 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 PPP4R1LQ9P1A2 415 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CNOT11Q9UKZ1 510 aaKnown RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 WIF1Q9Y5W5 379 aa10.99□□□□□ -0.65
UPF3A-210ENST00000493727 CHCHD2Q9Y6H1 151 aaPredicted RBP10.99□□□□□ -0.65
UPF3A-210ENST00000493727 FLNAP21333 2647 aaKnown RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 EXPH5Q8NEV8 1989 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CDHR4A6H8M9 788 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 AP3D1O14617 1153 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 BCKDKO14874 412 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ZNHIT1O43257 154 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF264O43296 627 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 FRS3O43559 492 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 HCRTR2O43614 444 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 GMFGO60234 142 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 LGI1O95970 557 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 FABP3P05413 133 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 RAP2AP10114 183 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 UQCRBP14927 111 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 HOXB6P17509 224 aaKnown RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 IGFBP2P18065 325 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CNR1P21554 472 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 SLC7A1P30825 629 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CASP3P42574 277 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 OR1E2P47887 323 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ELF3P78545 371 aaPredicted RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 SNTA1Q13424 505 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 NDUFAF6Q330K2 333 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 AP1ARQ63HQ0 302 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 SLC30A6Q6NXT4 461 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ZFP1Q6P2D0 407 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 TMEM81Q6P7N7 255 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 APOOLQ6UXV4 268 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CYP4Z1Q86W10 505 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF440Q8IYI8 595 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 OR4K17Q8NGC6 315 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 LILRB4Q8NHJ6 448 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CNOT9Q92600 299 aaKnown RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 JSRP1Q96MG2 331 aaPredicted RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ARHGDIGQ99819 225 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 EVA1AQ9H8M9 152 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 ZDHHC11Q9H8X9 412 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 DEPPQ9NTK1 212 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 CARD8Q9Y2G2 431 aa10.98□□□□□ -0.65
UPF3A-210ENST00000493727 FAM32AQ9Y421 112 aaKnown RBP10.98□□□□□ -0.65
UPF3A-210ENST00000493727 FAM47E-STBD1D6RA91 191 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 hCG_2039718K7EN88 272 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 EIF4E2O60573 245 aaKnown RBP10.97□□□□□ -0.65
UPF3A-210ENST00000493727 FKBP6O75344 327 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 NUDT14O95848 222 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 IGHG3P01860 377 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 MT-ND1P03886 318 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 GKN3PP0CG01 181 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 ITGA2P17301 1181 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 IFNA8P32881 189 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 RYKP34925 604 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 C17orf67Q0P5P2 114 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 NRF1Q16656 503 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 COMTD1Q86VU5 262 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 ZDHHC21Q8IVQ6 265 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 FAM109AQ8N4B1 249 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 TOR1AIP2Q8NFQ8 470 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 B4GALNT2Q8NHY0 566 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF563Q8TA94 476 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 DUSP19Q8WTR2 217 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
UPF3A-210ENST00000493727 CHID1Q9BWS9 393 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms