RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SSR3Q9UNL2 185 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 SLC6A5Q9Y345 797 aa9.19□□□□□ -0.94
PRPF3-206ENST00000493553 A0A087WUJ7 227 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SAGE2PA6NJ88 616 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF264O43296 627 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SIGLEC6O43699 453 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 AKAP8O43823 692 aaKnown RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 UTS2O95399 124 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 DDAH2O95865 285 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PTHP01270 115 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GKN3PP0CG01 181 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF883P0CG24 379 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 HSMCR30P0CW71 290 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 CKMT1AP12532 417 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PRG2P13727 222 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 APEHP13798 732 aaKnown RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GALP22466 123 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 S100A5P33763 92 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 LIPAP38571 399 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GRK6P43250 576 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GPR4P46093 362 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 HTR3AP46098 478 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 OR1D4P47884 311 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 RNF4P78317 190 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 HOXC5Q00444 222 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 CFHR1Q03591 330 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ACSM1Q08AH1 577 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 DMWDQ09019 674 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ERV3-1Q14264 604 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 KCNAB1Q14722 419 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SPCS2Q15005 226 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 NKAIN1Q4KMZ8 207 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 LCN1P1Q5VSP4 162 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 C16orf87Q6PH81 154 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 CXXC5Q7LFL8 322 aaKnown RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 OAFQ86UD1 273 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GPALPP1Q8IXQ4 340 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 KLHL36Q8N4N3 616 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 IQCF1Q8N6M8 205 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 TMCO5AQ8N6Q1 288 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 HAVCR2Q8TDQ0 301 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 LIPHQ8WWY8 451 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 FGF11Q92914 225 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 LOXL4Q96JB6 756 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SAMD8Q96LT4 415 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 IFT27Q9BW83 186 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PLA2G12AQ9BZM1 189 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SLC26A1Q9H2B4 701 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 EGLN3Q9H6Z9 239 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GAREM1Q9H706 876 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SYNDIG1Q9H7V2 258 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 FBXO34Q9NWN3 711 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 HAO2Q9NYQ3 351 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 OSGIN1Q9UJX0 560 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ICAM5Q9UMF0 924 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PPIEQ9UNP9 301 aaKnown RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 SIGLEC7Q9Y286 467 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 EXOGQ9Y2C4 368 aaKnown RBP9.18□□□□□ -0.94
PRPF3-206ENST00000493553 GSTK1Q9Y2Q3 226 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 ZNF337Q9Y3M9 751 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PCDHGB2Q9Y5G2 931 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 PEX16Q9Y5Y5 336 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 MAU2Q9Y6X3 613 aa9.18□□□□□ -0.94
PRPF3-206ENST00000493553 A8MU76 341 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 ALG1L2C9J202 215 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TMX2-CTNND1H3BSU7 103 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TAF4O00268 1085 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 IMPA2O14732 288 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 SLC30A4O14863 429 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 ARPC3O15145 178 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 CDC40O60508 579 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PTP4A3O75365 173 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 REM1O75628 298 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 IGKV1D-16P01601 117 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 THY1P04216 161 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 GP1BAP07359 652 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 HEXBP07686 556 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TSPAN19P0C672 248 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 GAAP10253 952 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PGCP20142 388 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 SLC1A3P43003 542 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TMED10P49755 219 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 MAP2K6P52564 334 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TAS2R43P59537 309 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 RUNX1T1Q06455 604 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 PLCXD2Q0VAA5 305 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 KRR1Q13601 381 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TPBGQ13641 420 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 EBPQ15125 230 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 TRAM1Q15629 374 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 CLEC12AQ5QGZ9 265 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 SLC30A6Q6NXT4 461 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 DPY19L2P2Q6ZN68 376 aa9.17□□□□□ -0.94
PRPF3-206ENST00000493553 MEPCEQ7L2J0 689 aaKnown RBP9.17□□□□□ -0.94
PRPF3-206ENST00000493553 OVCH1Q7RTY7 1134 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms