RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SSX1Q16384 188 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 ISXQ2M1V0 245 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 ANKDD1AQ495B1 522 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 PAQR6Q6TCH4 344 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 GDPGP1Q6ZNW5 385 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 SLC37A3Q8NCC5 494 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 KBTBD8Q8NFY9 601 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 OTULINQ96BN8 352 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 TMCO6Q96DC7 493 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 CMKLR1Q99788 373 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 MESP1Q9BRJ9 268 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 ULBP3Q9BZM4 244 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 OR51E2Q9H255 320 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 DCSTAMPQ9H295 470 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
PTPN7-216ENST00000492977 PLGRKTQ9HBL7 147 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 TNFRSF10DQ9UBN6 386 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 KLHL21Q9UJP4 597 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 OSGIN1Q9UJX0 560 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 PCDHGB6Q9Y5F9 930 aa12.81□□□□□ -0.36
PTPN7-216ENST00000492977 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-216ENST00000492977 TMEM200CA6NKL6 621 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 SLC22A31A6NKX4 558 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 ARPC3O15145 178 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 APOL3O95236 402 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 NADKO95544 446 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-216ENST00000492977 INHBBP09529 407 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 LIMS3P0CW19 117 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 LIMS4P0CW20 117 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 GP1BBP13224 206 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 DOC2BQ14184 412 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF74Q16587 644 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF517Q6ZMY9 492 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-216ENST00000492977 LRRC17Q8N6Y2 441 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 OR4F15Q8NGB8 312 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 OR5M3Q8NGP4 307 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 TTC9Q92623 222 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 MR1Q95460 341 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 ERMAPQ96PL5 475 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-216ENST00000492977 DEPDC7Q96QD5 511 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 GPX7Q96SL4 187 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-216ENST00000492977 NDUFB11Q9NX14 153 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 SEC14L4Q9UDX3 406 aa12.8□□□□□ -0.36
PTPN7-216ENST00000492977 LOC100506127A0A0U1RQW1 187 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 J3QRE1 110 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 SCO2O43819 266 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 FOXD2O60548 495 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-216ENST00000492977 CPEP16870 476 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 CXCR1P25024 350 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
PTPN7-216ENST00000492977 SOX3P41225 446 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 EGR4Q05215 589 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 FAM198BQ6UWH4 519 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 ADCK1Q86TW2 530 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 LSRQ86X29 649 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-216ENST00000492977 PHC2Q8IXK0 858 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 B4GALNT2Q8NHY0 566 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 HGDQ93099 445 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 TEAD3Q99594 435 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
PTPN7-216ENST00000492977 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 MED20Q9H944 212 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 MMP25Q9NPA2 562 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 NRIP3Q9NQ35 241 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 NANSQ9NR45 359 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 HAO2Q9NYQ3 351 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
PTPN7-216ENST00000492977 EXPH5Q8NEV8 1989 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 MCIDASD6RGH6 385 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 LRRN3E7EW58 273 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 WWP2O00308 870 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ADAM10O14672 748 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 NUDT14O95848 222 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 CD63P08962 238 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 SLC2A5P22732 501 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 RPL4P36578 427 aaKnown RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 TMED10P49755 219 aaKnown RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ENTPD1P49961 510 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 POLR2HP52434 150 aaKnown RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 RAB15P59190 212 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 TPBGQ13641 420 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 CRMP1Q14194 572 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 ZNF829Q3KNS6 432 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 DCAF12Q5T6F0 453 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 FAM199XQ6PEV8 388 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-216ENST00000492977 SHFQ7M4L6 423 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 CROCCP3Q8IVE0 287 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
PTPN7-216ENST00000492977 SLC15A4Q8N697 577 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms