RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 COMTD1Q86VU5 262 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 GABRG1Q8N1C3 465 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 DPP10Q8N608 796 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 DDIT4LQ96D03 193 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 PIK3IP1Q96FE7 263 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 TACO1Q9BSH4 297 aaKnown RBP21.91■■□□□ 1.1
UPF3A-209ENST00000492270 CCM2LQ9NUG4 571 aaPredicted RBP21.91■■□□□ 1.1
UPF3A-209ENST00000492270 PRSS50Q9UI38 385 aa21.91■■□□□ 1.1
UPF3A-209ENST00000492270 ZNF716A6NP11 495 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 TROVE2P10155 538 aaKnown RBP eCLIP21.9■■□□□ 1.1
UPF3A-209ENST00000492270 BNIP2Q12982 314 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 SCARB2Q14108 478 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 ADRM1Q16186 407 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 WBP2NLQ6ICG8 309 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 REEP3Q6NUK4 255 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 CCDC103Q8IW40 242 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 ZHX1-C8orf76Q96EF9 292 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 ACTR6Q9GZN1 396 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 TMEM181Q9P2C4 612 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 CORO2BQ9UQ03 480 aa21.9■■□□□ 1.1
UPF3A-209ENST00000492270 F8P00451 2351 aa21.89■■□□□ 1.1
UPF3A-209ENST00000492270 TEP1Q99973 2627 aaKnown RBP21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ZNF724A8MTY0 619 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 EVPLLA8MZ36 301 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 VIMP08670 466 aaKnown RBP21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ETS2P15036 469 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 FKBP2P26885 142 aaKnown RBP21.89■■□□□ 1.09
UPF3A-209ENST00000492270 OR3A2P47893 321 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ART1P52961 327 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 MTPNP58546 118 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 COPZ1P61923 177 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ZSWIM7Q19AV6 140 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 HSP90B2PQ58FF3 399 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 METTL21CQ5VZV1 264 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 PAMR1Q6UXH9 720 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ANKRD27Q96NW4 1050 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 HS3ST6Q96QI5 342 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 CGREF1Q99674 301 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 TMEM38AQ9H6F2 299 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 ARMC7Q9H6L4 198 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 HIVEP1P15822 2718 aa21.89■■□□□ 1.09
UPF3A-209ENST00000492270 TPST1O60507 370 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 ADAP00813 363 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 PSMB1P20618 241 aaKnown RBP21.88■■□□□ 1.09
UPF3A-209ENST00000492270 CXCR1P25024 350 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 LOXP28300 417 aaPredicted RBP21.88■■□□□ 1.09
UPF3A-209ENST00000492270 AQP1P29972 269 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 ARFIP2P53365 341 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 NFYCQ13952 458 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 GLIPR1L2Q4G1C9 344 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 NINJ1Q92982 152 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 C3orf49Q96BT1 292 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 FANCFQ9NPI8 374 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 TRAPPC4Q9Y296 219 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 GPR52Q9Y2T5 361 aa21.88■■□□□ 1.09
UPF3A-209ENST00000492270 PRRC2AP48634 2157 aaKnown RBP21.87■■□□□ 1.09
UPF3A-209ENST00000492270 IGKV3D-15A0A087WSY6 115 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 FBP2O00757 339 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 DNPH1O43598 174 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 PPP3CBP16298 524 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 FPR1P21462 350 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 PRKAR1BP31321 381 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 CAPRIN1Q14444 709 aaKnown RBP21.87■■□□□ 1.09
UPF3A-209ENST00000492270 GALNT5Q7Z7M9 940 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 PTOV1Q86YD1 416 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 PIGXQ8TBF5 258 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 TSPEARQ8WU66 669 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 S100PBPQ96BU1 408 aa21.87■■□□□ 1.09
UPF3A-209ENST00000492270 ATE1O95260 518 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 SLC6A2P23975 617 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 DNASE1P24855 282 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 MAP2K6P52564 334 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 SLC35A1P78382 337 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 H3F3AP84243 136 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 PDK3Q15120 406 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 SFRP5Q5T4F7 317 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 WFDC8Q8IUA0 241 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 CCDC134Q9H6E4 229 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 MED4Q9NPJ6 270 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 EMC3Q9P0I2 261 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 MED13LQ71F56 2210 aa21.86■■□□□ 1.09
UPF3A-209ENST00000492270 MAP1AP78559 2803 aaPredicted RBP21.85■■□□□ 1.09
UPF3A-209ENST00000492270 TMEM229AB2RXF0 380 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 KLF4O43474 513 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 RAF1P04049 648 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 NTF4P34130 210 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 IDUAP35475 653 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 CEACAM7Q14002 265 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 CYP51A1Q16850 503 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 DHRS4L2Q6PKH6 230 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 Q6ZT83 130 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 ATG4DQ86TL0 474 aaPredicted RBP21.85■■□□□ 1.09
UPF3A-209ENST00000492270 KRT73Q86Y46 540 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 HIPK4Q8NE63 616 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 PRR14Q9BWN1 585 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 POTEKPQ9BYX7 375 aa21.85■■□□□ 1.09
UPF3A-209ENST00000492270 LIPT2A6NK58 231 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 LYZL6O75951 148 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 IGHV3-9P01782 118 aa21.84■■□□□ 1.09
UPF3A-209ENST00000492270 IL32P24001 234 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms