RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 VPS13CQ709C8 3753 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 ZC3H12DA2A288 527 aaKnown RBP13.27□□□□□ -0.29
TOM1-215ENST00000491987 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 ZNF208O43345 1280 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
TOM1-215ENST00000491987 THBS1P07996 1170 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.29
TOM1-215ENST00000491987 STK11Q15831 433 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 P3H2Q8IVL5 708 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 CCDC103Q8IW40 242 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 CLIP4Q8N3C7 705 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 CADM2Q8N3J6 435 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 MAL2Q969L2 176 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 PIP5K1AQ99755 562 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 TMEM204Q9BSN7 226 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 POTEKPQ9BYX7 375 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 ADAM19Q9H013 955 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 RAD21L1Q9H4I0 556 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 A4GALTQ9NPC4 353 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 DLL4Q9NR61 685 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 ARGLU1Q9NWB6 273 aaPredicted RBP13.27□□□□□ -0.29
TOM1-215ENST00000491987 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 TRAPPC4Q9Y296 219 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 CHST2Q9Y4C5 530 aa13.27□□□□□ -0.29
TOM1-215ENST00000491987 RAI1Q7Z5J4 1906 aaPredicted RBP13.27□□□□□ -0.29
TOM1-215ENST00000491987 GPR171O14626 319 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 PRG2P13727 222 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 NCF2P19878 526 aaPredicted RBP13.26□□□□□ -0.29
TOM1-215ENST00000491987 COX5AP20674 150 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 IGHV1-2P23083 117 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 CXCR1P25024 350 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 ACAA2P42765 397 aaKnown RBP13.26□□□□□ -0.29
TOM1-215ENST00000491987 SLC16A1P53985 500 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 COPZ1P61923 177 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 SLC35A1P78382 337 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 FADDQ13158 208 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 ZNF311Q5JNZ3 666 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 Q5PR19 223 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 LRIF1Q5T3J3 769 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 SHEQ5VZ18 495 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 ATG4DQ86TL0 474 aaPredicted RBP13.26□□□□□ -0.29
TOM1-215ENST00000491987 UBE2J2Q8N2K1 259 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 CKAP2Q8WWK9 683 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 HSD17B8Q92506 261 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 APH1AQ96BI3 265 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
TOM1-215ENST00000491987 PERPQ96FX8 193 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 SPATA9Q9BWV2 254 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
TOM1-215ENST00000491987 C5orf58C9J3I9 102 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 HS3ST1O14792 307 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 CLOCKO15516 846 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 ARHGEF9O43307 516 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 FRS3O43559 492 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 EIF1BO60739 113 aaKnown RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 BMP2P12643 396 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 H2AFXP16104 143 aaPredicted RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 ADSLP30566 484 aaPredicted RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 NTF4P34130 210 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 IDUAP35475 653 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 ATP4BP51164 291 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 MAP2K6P52564 334 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 H3F3AP84243 136 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 BNIP2Q12982 314 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 SQLEQ14534 574 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 ZSWIM7Q19AV6 140 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 AGKQ53H12 422 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 NCMAPQ5T1S8 102 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 WBP2NLQ6ICG8 309 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 SERPINA11Q86U17 422 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 C10orf111Q8N326 155 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
TOM1-215ENST00000491987 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 NAA11Q9BSU3 229 aaPredicted RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 ESRP2Q9H6T0 727 aaKnown RBP13.25□□□□□ -0.29
TOM1-215ENST00000491987 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 NGBQ9NPG2 151 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 IFT52Q9Y366 437 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
TOM1-215ENST00000491987 MRPL33O75394 65 aaKnown RBP13.24□□□□□ -0.29
TOM1-215ENST00000491987 PGM3O95394 542 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 CNOT4O95628 575 aaKnown RBP13.24□□□□□ -0.29
TOM1-215ENST00000491987 CD3EP07766 207 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 GGT1P19440 569 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 HOXC5Q00444 222 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 CEACAM7Q14002 265 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 PPA1Q15181 289 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 OR7A5Q15622 319 aa13.24□□□□□ -0.29
TOM1-215ENST00000491987 OTUD3Q5T2D3 398 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms