RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NAT9Q9BTE0 207 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 RHOJQ9H4E5 214 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 ALG9Q9H6U8 611 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 CAB39LQ9H9S4 337 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 OBP2BQ9NPH6 170 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 NECAP2Q9NVZ3 263 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 AHSPQ9NZD4 102 aa6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 MRTO4Q9UKD2 239 aaKnown RBP6.05□□□□□ -1.44
PDLIM1-203ENST00000490391 IGHV2OR16-5A0A0B4J2B6 119 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 A0A1W2PQD3 144 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 M0R233 179 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 PIP5K1BO14986 540 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MRPL33O75394 65 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MBD3O95983 291 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 FGGP02679 453 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 S100BP04271 92 aaPredicted RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 IL3P08700 152 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 CELA3BP08861 270 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MPGP29372 298 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TYK2P29597 1187 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 EVX1P49640 407 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ATP4BP51164 291 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TRA2BP62995 288 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MVKQ03426 396 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 RNASEH2BQ5TBB1 312 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 FRG2Q64ET8 278 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 STEAP4Q687X5 459 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 KLHL24Q6TFL4 600 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TMEM107Q6UX40 140 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TMPPEQ6ZT21 453 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ISCA2Q86U28 154 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ADGRG3Q86Y34 549 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MISPQ8IVT2 679 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 WDFY1Q8IWB7 410 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 SAMD14Q8IZD0 417 aaPredicted RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 FAM9CQ8IZT9 166 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 NOA1Q8NC60 698 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 RNF214Q8ND24 703 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 GPR119Q8TDV5 335 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 EXOSC8Q96B26 276 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 FRG2BQ96QU4 278 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 OR5B2Q96R09 309 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 DIRC2Q96SL1 478 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF416Q9BWM5 594 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 FAIM2Q9BWQ8 316 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MRPL37Q9BZE1 423 aaKnown RBP6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 PRDM13Q9H4Q3 707 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 TCF7L1Q9HCS4 588 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 PFDN4Q9NQP4 134 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC35C2Q9NQQ7 365 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MMP26Q9NRE1 261 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 OXSMQ9NWU1 459 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ASH2LQ9UBL3 628 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 REV1Q9UBZ9 1251 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 ALMS1Q8TCU4 4167 aa6.04□□□□□ -1.44
PDLIM1-203ENST00000490391 MDFIC2A0A1B0GVS7 189 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 MYO1GB0I1T2 1018 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 SUPT3HB4E1H0 165 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TRIM49D1C9J1S8 452 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 GPR171O14626 319 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 CBFA2T2O43439 604 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 SUPT3HO75486 399 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 NKX2-2O95096 273 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 KCNH1O95259 989 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 PPP1R3DO95685 299 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 GPANK1O95872 356 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 CSF1P09603 554 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 IGHV4-38-2P0DP08 117 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TIA1P31483 386 aaKnown RBP eCLIP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 GABRA3P34903 492 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 SEC24CP53992 1094 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TUBA1BP68363 451 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TUBA4AP68366 448 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 LCN2P80188 198 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 DLG1Q12959 904 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 SNTB2Q13425 540 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 FRG1Q14331 258 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 FAM219BQ5XKK7 198 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 C3orf33Q6P1S2 294 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 FIP1L1Q6UN15 594 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 CASP12Q6UXS9 341 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TUBA1AQ71U36 451 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 GOLGA7Q7Z5G4 137 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 MTDHQ86UE4 582 aaKnown RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 JAZF1Q86VZ6 243 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 FAM169BQ8N8A8 192 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 CEP70Q8NHQ1 597 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 KTI12Q96EK9 354 aaPredicted RBP6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 RBBP8Q99708 897 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 NELFAQ9H3P2 528 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 TMPRSS5Q9H3S3 457 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 MS4A5Q9H3V2 200 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 IPPKQ9H8X2 491 aa6.03□□□□□ -1.44
PDLIM1-203ENST00000490391 SENP1Q9P0U3 644 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms