RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ARIH2OSQ8N7S6 290 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 OIT3Q8WWZ8 545 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 PROX1Q92786 737 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 AMBRA1Q9C0C7 1298 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 NOP53Q9NZM5 478 aaKnown RBP13.91□□□□□ -0.18
PLOD3-216ENST00000489927 TMEM181Q9P2C4 612 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 ATP23Q9Y6H3 246 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
PLOD3-216ENST00000489927 AGR2O95994 175 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 BMP4P12644 408 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 USF1P22415 310 aaPredicted RBP13.9□□□□□ -0.18
PLOD3-216ENST00000489927 FKBP2P26885 142 aaKnown RBP13.9□□□□□ -0.18
PLOD3-216ENST00000489927 IDH2P48735 452 aaKnown RBP13.9□□□□□ -0.18
PLOD3-216ENST00000489927 KCNJ10P78508 379 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 AP1ARQ63HQ0 302 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 ARFGAP2Q8N6H7 521 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 OR8J2Q8NGG1 315 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 SHARPINQ9H0F6 387 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 FKRPQ9H9S5 495 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
PLOD3-216ENST00000489927 SLC17A5Q9NRA2 495 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 POLE3Q9NRF9 147 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 SLC7A10Q9NS82 523 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 UPB1Q9UBR1 384 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 LPAR3Q9UBY5 353 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 PCDHGB4Q9UN71 923 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 TRAPPC4Q9Y296 219 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 FLVCR1Q9Y5Y0 555 aa13.9□□□□□ -0.18
PLOD3-216ENST00000489927 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PRAMEF27A3QJZ7 478 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 ATP6V1G2-DDX39BF2Z307 99 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 AP3D1O14617 1153 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 SCN2BO60939 215 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
PLOD3-216ENST00000489927 CSF3P09919 207 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 IMPDH2P12268 514 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 UQCRC2P22695 453 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 APOBEC3AP31941 199 aaPredicted RBP13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PHC1P78364 1004 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 LSM11P83369 360 aaKnown RBP eCLIP13.89□□□□□ -0.19
PLOD3-216ENST00000489927 CHRNB3Q05901 458 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 TSPO2Q5TGU0 170 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 SAXO2Q658L1 398 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 C17orf78Q8N4C9 275 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 C1orf162Q8NEQ5 155 aaPredicted RBP13.89□□□□□ -0.19
PLOD3-216ENST00000489927 CNOT9Q92600 299 aaKnown RBP13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PPP1R36Q96LQ0 422 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PARPBPQ9NWS1 579 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 AMDHD2Q9Y303 409 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PMF1-BGLAPU3KQ54 211 aa13.89□□□□□ -0.19
PLOD3-216ENST00000489927 PRSS51A0A1B0GVH4 220 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 TMEM72A0PK05 275 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 LMX1BO60663 402 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
PLOD3-216ENST00000489927 C1QCP02747 245 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 BPGMP07738 259 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 CREB1P16220 341 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 IGFBP5P24593 272 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 HTR3AP46098 478 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 SLC35A1P78382 337 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 SLC17A1Q14916 467 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 PDCD2Q16342 344 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-216ENST00000489927 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 GPAT3Q53EU6 434 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 RIBC1Q8N443 379 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-216ENST00000489927 DDIT4LQ96D03 193 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 NEURL3Q96EH8 262 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 DPY30Q9C005 99 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 AKTIPQ9H8T0 292 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-216ENST00000489927 OSGIN1Q9UJX0 560 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 YLPM1P49750 1951 aaKnown RBP13.88□□□□□ -0.19
PLOD3-216ENST00000489927 NBEAL1Q6ZS30 2694 aa13.88□□□□□ -0.19
PLOD3-216ENST00000489927 ZNF208O43345 1280 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 NUDT17P0C025 328 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 TACR3P29371 465 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 THBS2P35442 1172 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 KHKP50053 298 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 POLR2HP52434 150 aaKnown RBP13.87□□□□□ -0.19
PLOD3-216ENST00000489927 HPCAP84074 193 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
PLOD3-216ENST00000489927 GGTLC2Q14390 218 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 SWI5Q1ZZU3 235 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 ANXA8L1Q5VT79 327 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 FBXO17Q96EF6 278 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 NAA11Q9BSU3 229 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-216ENST00000489927 MARCOQ9UEW3 520 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-216ENST00000489927 LGALS13Q9UHV8 139 aa13.87□□□□□ -0.19
PLOD3-216ENST00000489927 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms