RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 OR7A10O76100 309 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 RCBTB2O95199 551 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 SOX14O95416 240 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 CLIC3O95833 236 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 PTNP21246 168 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 FKBP2P26885 142 aaKnown RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 EIF2S3P41091 472 aaKnown RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 ISL1P61371 349 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 CDK5Q00535 292 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 FOXF1Q12946 379 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 RAPSNQ13702 412 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF74Q16587 644 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 TMEM44Q2T9K0 475 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 ANKDD1AQ495B1 522 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 BROXQ5VW32 411 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 SPINK14Q6IE38 97 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 KRT80Q6KB66 452 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 SLC46A3Q7Z3Q1 461 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 MEX3DQ86XN8 651 aaKnown RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 FDCSPQ8NFU4 85 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 POC1BQ8TC44 478 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 OSTF1Q92882 214 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 FAM173AQ9BQD7 235 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 DEPPQ9NTK1 212 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 VDAC3Q9Y277 283 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 SIGLEC7Q9Y286 467 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 CEP295Q9C0D2 2601 aa12.82□□□□□ -0.36
VPS26A-205ENST00000489656 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
VPS26A-205ENST00000489656 A6NL46 340 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 G3V3Y1 287 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 H3BN98 237 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 NME2P1O60361 137 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 HCN1O60741 890 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 PTP4A3O75365 173 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 WISP1O95388 367 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 MT-ATP6P00846 226 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 SAGP10523 405 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF17P17021 662 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 NME2P22392 152 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 DPP4P27487 766 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ELK4P28324 431 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 SRD5A2P31213 254 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 CCL11P51671 97 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 CHN2P52757 468 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 TEKQ02763 1124 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 FOXO1Q12778 655 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 FHL1Q13642 323 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 C12orf73Q69YU5 71 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 Q6ZPB1 254 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 P3H2Q8IVL5 708 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 SPACA3Q8IXA5 215 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 OR2M7Q8NG81 312 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 TEX47Q8TBZ9 253 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 FANK1Q8TC84 345 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 GATA6Q92908 595 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 SCMH1Q96GD3 660 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 PLA2G12AQ9BZM1 189 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 UBQLN3Q9H347 655 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 FKRPQ9H9S5 495 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ZFP64Q9NPA5 681 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 TUBA8Q9NY65 449 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 PLA2G3Q9NZ20 509 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF229Q9UJW7 825 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 PCDHGB5Q9Y5G0 923 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 SPIN1Q9Y657 262 aaPredicted RBP12.81□□□□□ -0.36
VPS26A-205ENST00000489656 ASPMQ8IZT6 3477 aa12.81□□□□□ -0.36
VPS26A-205ENST00000489656 MED12Q93074 2177 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 ZIC3O60481 467 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 F10P00742 488 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 BGLAPP02818 100 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SP1P08047 785 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 TSPAN19P0C672 248 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 CD46P15529 392 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 FUT1P19526 365 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 POU1F1P28069 291 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 GIPRP48546 466 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SMSP52788 366 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 FXYD6P3P58550 94 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 CDC42P60953 191 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 RPS4XP62701 263 aaKnown RBP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SELENBP1Q13228 472 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.8□□□□□ -0.36
VPS26A-205ENST00000489656 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 C1orf140Q5VVS0 124 aa12.8□□□□□ -0.36
VPS26A-205ENST00000489656 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms