RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RPS26P11Q5JNZ5 115 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-213ENST00000489045 YTHDF3Q7Z739 585 aaKnown RBP20.34■□□□□ 0.85
COL9A3-213ENST00000489045 ATG4DQ86TL0 474 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-213ENST00000489045 BIVMQ86UB2 503 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 CCDC103Q8IW40 242 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF440Q8IYI8 595 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 OR52P1PQ8NH57 321 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 SLC38A5Q8WUX1 472 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 TMEM171Q8WVE6 324 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 Q96MF0 132 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 GSX2Q9BZM3 304 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 ESRP2Q9H6T0 727 aaKnown RBP20.34■□□□□ 0.85
COL9A3-213ENST00000489045 TRAPPC4Q9Y296 219 aa20.34■□□□□ 0.85
COL9A3-213ENST00000489045 NSD1Q96L73 2696 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-213ENST00000489045 CADP27708 2225 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 USF3Q68DE3 2245 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 CLOCKO15516 846 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 CNOT4O95628 575 aaKnown RBP20.33■□□□□ 0.85
COL9A3-213ENST00000489045 IGHV3-9P01782 118 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 CD3EP07766 207 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 INHBBP09529 407 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 IMPDH2P12268 514 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 ADSLP30566 484 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-213ENST00000489045 SLC16A1P53985 500 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 PRSS57Q6UWY2 283 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 LRRC8CQ8TDW0 803 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 GTF2H4Q92759 462 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 APH1AQ96BI3 265 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 TMEM19Q96HH6 336 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 PAIP1Q9H074 479 aaKnown RBP20.33■□□□□ 0.85
COL9A3-213ENST00000489045 SLCO1B3Q9NPD5 702 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 TCF7L2Q9NQB0 619 aa20.33■□□□□ 0.85
COL9A3-213ENST00000489045 ZNF443Q9Y2A4 671 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-213ENST00000489045 ZC3H12DA2A288 527 aaKnown RBP20.32■□□□□ 0.84
COL9A3-213ENST00000489045 GPR171O14626 319 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 POLR3GO15318 223 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-213ENST00000489045 GKN3PP0CG01 181 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 STX1BP61266 288 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 SLC35A1P78382 337 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 H3F3AP84243 136 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 FBXW9Q5XUX1 488 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 ADAM5Q6NVV9 412 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 SLC2A7Q6PXP3 512 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 UBE2J2Q8N2K1 259 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 LILRB1Q8NHL6 650 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-213ENST00000489045 POM121Q96HA1 1249 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 ATP6V1G3Q96LB4 118 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 THUMPD1Q9NXG2 353 aaKnown RBP20.32■□□□□ 0.84
COL9A3-213ENST00000489045 PCDHB14Q9Y5E9 798 aa20.32■□□□□ 0.84
COL9A3-213ENST00000489045 TGDSO95455 350 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 GGT1P19440 569 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 NTF4P34130 210 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 ACAA2P42765 397 aaKnown RBP20.31■□□□□ 0.84
COL9A3-213ENST00000489045 MRPL19P49406 292 aaKnown RBP20.31■□□□□ 0.84
COL9A3-213ENST00000489045 BSPH1Q075Z2 132 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 PPA1Q15181 289 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 TTMPQ5BVD1 217 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 RNF220Q5VTB9 566 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 ZNF433Q8N7K0 673 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-213ENST00000489045 EBF4Q9BQW3 602 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 ADAM19Q9H013 955 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 CXorf56Q9H5V9 222 aa20.31■□□□□ 0.84
COL9A3-213ENST00000489045 TMEM247A6NEH6 219 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 DPRXA6NFQ7 191 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 H7C1Q1 480 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 EIF1BO60739 113 aaKnown RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 MRPL33O75394 65 aaKnown RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 THBS1P07996 1170 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 NUDT7P0C024 238 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 HOXB9P17482 250 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 IDH3AP50213 366 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 MAP2K6P52564 334 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 LARS2Q15031 903 aaKnown RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 RGNQ15493 299 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 TIMM23BQ5SRD1 257 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 Q71RC1 249 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 CIARTQ8N365 385 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 CLIP4Q8N3C7 705 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 CADM2Q8N3J6 435 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 KBTBD8Q8NFY9 601 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 NEUROG1Q92886 237 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 FBXW5Q969U6 566 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 NAA11Q9BSU3 229 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-213ENST00000489045 LAMP3Q9UQV4 416 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 CHST2Q9Y4C5 530 aa20.3■□□□□ 0.84
COL9A3-213ENST00000489045 A0A0G2JPF8 293 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 OR5H1A6NKK0 313 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 HNRNPCL2B2RXH8 293 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 HNRNPCL3B7ZW38 293 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 CLIC1O00299 241 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 HNRNPCL1O60812 293 aaKnown RBP20.29■□□□□ 0.84
COL9A3-213ENST00000489045 TMCC2O75069 709 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 RAD51DO75771 328 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 PGM3O95394 542 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 HNRNPCL4P0DMR1 293 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 PAX1P15863 534 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 HOXB4P17483 251 aaPredicted RBP20.29■□□□□ 0.84
COL9A3-213ENST00000489045 CXCR1P25024 350 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 IDUAP35475 653 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 WBP2NLQ6ICG8 309 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms