RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PALMDQ9NP74 551 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 KLRF1Q9NZS2 232 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 REV1Q9UBZ9 1251 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 RALYQ9UKM9 306 aaKnown RBP17.62■□□□□ 0.41
CCM2-216ENST00000488727 SLC9A8Q9Y2E8 581 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 WDR45Q9Y484 360 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 HRH3Q9Y5N1 445 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 CHD6Q8TD26 2715 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 A0A1W2PRQ8 180 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 C2orf72A6NCS6 295 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 C17orf51A8MQB3 221 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SYT5O00445 386 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 KIAA0513O60268 411 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 LGI1O95970 557 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 TBXA2RP21731 343 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 LCN1P31025 176 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 TGFBR2P37173 567 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 MEOX1P50221 254 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 GAS1P54826 345 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 UGT2B15P54855 530 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 CHRNEQ04844 493 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 DGCR6Q14129 220 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SEC23BQ15437 767 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 INPP5JQ15735 1006 aaPredicted RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 RPUSD3Q6P087 351 aaKnown RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 LACC1Q8IV20 430 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 VANGL1Q8TAA9 524 aaPredicted RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 ZG16BQ96DA0 208 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 TAAR6Q96RI8 345 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 PINK1Q9BXM7 581 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 UBQLN4Q9NRR5 601 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 CNOT2Q9NZN8 540 aaKnown RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 NCKAP5O14513 1909 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SH3PXD2BA1X283 911 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 KLRC4-KLRK1H3BQV0 150 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 UGT2B17O75795 530 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 LCKP06239 509 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 NGFRP08138 427 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 GUSBP08236 651 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 POU2F1P14859 743 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 RFC3P40938 356 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 FOXO1Q12778 655 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SNTA1Q13424 505 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 IRF3Q14653 427 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 FNDC7Q5VTL7 733 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SLX4IPQ5VYV7 408 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 PGBD2Q6P3X8 592 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 MARCH3Q86UD3 253 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 COMTD1Q86VU5 262 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 RBM45Q8IUH3 476 aaKnown RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 NR4A3Q92570 626 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SLC38A4Q969I6 547 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 FAM173AQ9BQD7 235 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 QRSL1Q9H0R6 528 aaKnown RBP17.61■□□□□ 0.41
CCM2-216ENST00000488727 POLE3Q9NRF9 147 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 CALML5Q9NZT1 146 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 COL6A6A6NMZ7 2263 aa17.61■□□□□ 0.41
CCM2-216ENST00000488727 SCO2O43819 266 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 TRIM3O75382 744 aaPredicted RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 EPPINO95925 133 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 PRB1P04280 392 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 RNF144AP50876 292 aaPredicted RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 ATP12AP54707 1039 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 SNRPGP62308 76 aaKnown RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 ALDH6A1Q02252 535 aaKnown RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 SOWAHCQ53LP3 525 aaPredicted RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 SLC30A6Q6NXT4 461 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 CD300LDQ6UXZ3 194 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 ZNF619Q8N2I2 560 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 ZFP62Q8NB50 900 aaPredicted RBP17.6■□□□□ 0.41
CCM2-216ENST00000488727 PRRC1Q96M27 445 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 FRMD6Q96NE9 622 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 WFDC6Q9BQY6 131 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 TBC1D23Q9NUY8 699 aa17.6■□□□□ 0.41
CCM2-216ENST00000488727 FAM208BQ5VWN6 2430 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 EFCAB10A6NFE3 127 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 LRRC3CA6NJW4 275 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 B4DXG7 233 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 ALG1L2C9J202 215 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 NR4A1P22736 598 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 MLLT10P55197 1068 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 MAPK14Q16539 360 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 RNFT1Q5M7Z0 435 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 TMEM201Q5SNT2 666 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 PDZK1Q5T2W1 519 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 C12orf73Q69YU5 71 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 FNDC8Q8TC99 324 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 TRUB1Q8WWH5 349 aaKnown RBP17.59■□□□□ 0.41
CCM2-216ENST00000488727 TBL1XR1Q9BZK7 514 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 NTNG1Q9Y2I2 539 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 WIF1Q9Y5W5 379 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 PRRC2CQ9Y520 2896 aaKnown RBP17.59■□□□□ 0.41
CCM2-216ENST00000488727 PCNX3Q9H6A9 2034 aa17.59■□□□□ 0.41
CCM2-216ENST00000488727 M0R3H8 397 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 OR10H3O60404 316 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 SNX4O95219 450 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 PIPP12273 146 aaPredicted RBP17.58■□□□□ 0.41
CCM2-216ENST00000488727 BMXP51813 675 aa17.58■□□□□ 0.41
CCM2-216ENST00000488727 CD226Q15762 336 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms