RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 DIABLOQ9NR28 239 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 SLC16A7O60669 478 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 CD3GP09693 182 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 PEBP1P30086 187 aaKnown RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 PLK5Q496M5 336 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 NXNL2Q5VZ03 156 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 S100A16Q96FQ6 103 aaKnown RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TSSK2Q96PF2 358 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 OR6C1Q96RD1 312 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 GABRG3Q99928 467 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TAS2R10Q9NYW0 307 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 PAHP00439 452 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 IFNA6P05013 189 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 EMDP50402 254 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 ACTA2P62736 377 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 ACTG2P63267 376 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 SGCBQ16585 318 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 LMF1Q96S06 567 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 HSPB11Q9Y547 144 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 HCRTR1O43613 425 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 UTS2O95399 124 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 CT62P0C5K7 136 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 SRFP11831 508 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 IL7P13232 177 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 PRPS1P60891 318 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 ADAM8P78325 824 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 CHAF1BQ13112 559 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 OR7A5Q15622 319 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 SGCAQ16586 387 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 FCRL6Q6DN72 434 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF425Q6IV72 752 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 DPAGT1Q9H3H5 408 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 PTGES2Q9H7Z7 377 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 MOV10Q9HCE1 1003 aaKnown RBP12.21□□□□□ -0.45
HMGN1-216ENST00000486741 C20orf141Q9NUB4 165 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 BAIAP2Q9UQB8 552 aa12.21□□□□□ -0.45
HMGN1-216ENST00000486741 G3V3Y1 287 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 FAUP35544 74 aaKnown RBP12.21□□□□□ -0.46
HMGN1-216ENST00000486741 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.46
HMGN1-216ENST00000486741 OR4C15Q8NGM1 316 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 CCDC59Q9P031 241 aaKnown RBP12.21□□□□□ -0.46
HMGN1-216ENST00000486741 CLEC1BQ9P126 229 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.46
HMGN1-216ENST00000486741 SPTA1P02549 2419 aa12.21□□□□□ -0.46
HMGN1-216ENST00000486741 ANKRD61A6NGH8 418 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 PTTG1O95997 202 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 PCMT1P22061 227 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 CTBP2P56545 445 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 OCLNQ16625 522 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 WBP2NLQ6ICG8 309 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 ELMOD2Q8IZ81 293 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 RNF113BQ8IZP6 322 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 OR4C3Q8NH37 302 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 FCRL1Q96LA6 429 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TEAD3Q99594 435 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 CDCA4Q9BXL8 241 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 COQ3Q9NZJ6 369 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 VSTM2BA6NLU5 285 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SEC14L5O43304 696 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 PNMTP11086 282 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 HTR1FP30939 366 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 OTX2P32243 289 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TLE3Q04726 772 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 POU4F2Q12837 409 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 DUSP8Q13202 625 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SNTB2Q13425 540 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 NTRK2Q16620 822 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 RAET1LQ5VY80 246 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 DPY19L4Q7Z388 723 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TM9SF4Q92544 642 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 CCDC32Q9BV29 185 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 ZNF337Q9Y3M9 751 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 HRO43593 1189 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 IL1AP01583 271 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SNRPBP14678 240 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 GABRA5P31644 462 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 INSL4Q14641 139 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 FXNQ16595 210 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TMEM69Q5SWH9 247 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 PRAMEF20Q5VT98 475 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 NXPE2Q96DL1 559 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SYT4Q9H2B2 425 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 SYNPO2LQ9H987 977 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 PAQR5Q9NXK6 330 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 EIF3KQ9UBQ5 218 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 FARSAQ9Y285 508 aaKnown RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 TRBV11-1A0A0K0K1C0 115 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 KDM4EB2RXH2 506 aaPredicted RBP12.2□□□□□ -0.46
HMGN1-216ENST00000486741 NPIPB8E9PQR5 432 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 JMJD7P0C870 316 aa12.2□□□□□ -0.46
HMGN1-216ENST00000486741 S1PR1P21453 382 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms