RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TMEM255BQ8WV15 326 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 NR4A3Q92570 626 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 STMN2Q93045 179 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SFXN2Q96NB2 322 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 BARD1Q99728 777 aaKnown RBP11.52□□□□□ -0.57
HDAC6-229ENST00000486665 PIGQQ9BRB3 760 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 TMEM185BQ9H7F4 350 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 C12orf10Q9HB07 376 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 AGPAT4Q9NRZ5 378 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SELENONQ9NZV5 590 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 DNAJB9Q9UBS3 223 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 LYVE1Q9Y5Y7 322 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 A0A087WUU8 490 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 TRGV5A0A0B4J1U4 118 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 A0A1W2PRQ8 180 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 ZC3H12DA2A288 527 aaKnown RBP11.51□□□□□ -0.57
HDAC6-229ENST00000486665 H0YHG0 523 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 GNGT2O14610 69 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 GADD45GO95257 159 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 LDLRP01130 860 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 PNMTP11086 282 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 PEPDP12955 493 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 BMP7P18075 431 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 CHMP24386 653 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 IFNA8P32881 189 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 UGT2B15P54855 530 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 HSF1Q00613 529 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 EGR4Q05215 589 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 DGCR6Q14129 220 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 RCN1Q15293 331 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 DCST1Q5T197 706 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
HDAC6-229ENST00000486665 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 FAM180AQ6UWF9 173 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 NEIL3Q8TAT5 605 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 SLC7A13Q8TCU3 470 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 DTNBP1Q96EV8 351 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 DNAJA3Q96EY1 480 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 MPP4Q96JB8 637 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 ALPK1Q96QP1 1244 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF426Q9BUY5 554 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 SEMA6AQ9H2E6 1030 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 LDAHQ9H6V9 325 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 SERINC1Q9NRX5 453 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 ASF1BQ9NVP2 202 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 TNFRSF10DQ9UBN6 386 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 NKX1-2Q9UD57 310 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-229ENST00000486665 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 U3KQV3 271 aa11.51□□□□□ -0.57
HDAC6-229ENST00000486665 A0A1B0GVC2 190 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 H0YC42 278 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 H3BML4 177 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 ADAMDEC1O15204 470 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 PIP5K1CO60331 668 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 HCN1O60741 890 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 DEAF1O75398 565 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 FCGR1AP12314 374 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 ANPEPP15144 967 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 LHX2P50458 406 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 TPD52P55327 224 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 CLDN15P56746 228 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 CLDN20P56880 219 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 SMIM11AP58511 58 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 RAC1P63000 192 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 LAPTM4AQ15012 233 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 TMEM176BQ3YBM2 270 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 FGD3Q5JSP0 725 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 TTC33Q6PID6 262 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 FGD2Q7Z6J4 655 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 MEX3DQ86XN8 651 aaKnown RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 CHERPQ8IWX8 916 aaKnown RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 HS3ST5Q8IZT8 346 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 PFN4Q8NHR9 129 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 FAR1Q8WVX9 515 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 TMEM239Q8WW34 195 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 ACOT11Q8WXI4 607 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 SMPDL3BQ92485 455 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 KTI12Q96EK9 354 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 GPR137Q96N19 417 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 EPYCQ99645 322 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 ANKRD19PQ9H560 264 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 EXO5Q9H790 373 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 REEP1Q9H902 201 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 MEPEQ9NQ76 525 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 SAMHD1Q9Y3Z3 626 aaKnown RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 MAGED1Q9Y5V3 778 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-229ENST00000486665 AP4B1Q9Y6B7 739 aa11.5□□□□□ -0.57
HDAC6-229ENST00000486665 A0A0J9YW62 118 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 A0A1B0GTH9 108 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 SH3PXD2BA1X283 911 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 A8MVM7 634 aa11.49□□□□□ -0.57
HDAC6-229ENST00000486665 KPNA4O00629 521 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF208O43345 1280 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms