RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DNAH9Q9NYC9 4486 aa12.97□□□□□ -0.33
U2AF1-211ENST00000486519 HMX2A2RU54 273 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 FAM181BA6NEQ2 426 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 TTC36A6NLP5 189 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 M0R233 179 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 IGKV3-15P01624 115 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 C2P06681 752 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 TFPIP10646 304 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 NAT2P11245 290 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 SELEP16581 610 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 NTSP30990 170 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 MAGEB1P43366 347 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 RAG2P55895 527 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 POU3F1Q03052 451 aaPredicted RBP12.96□□□□□ -0.33
U2AF1-211ENST00000486519 MERTKQ12866 999 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 CDC73Q6P1J9 531 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 SZRD1Q7Z422 152 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 CDRT4Q8N9R6 151 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 NOA1Q8NC60 698 aaKnown RBP12.96□□□□□ -0.33
U2AF1-211ENST00000486519 CDS1Q92903 461 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 KTI12Q96EK9 354 aaPredicted RBP12.96□□□□□ -0.33
U2AF1-211ENST00000486519 AURKBQ96GD4 344 aaPredicted RBP12.96□□□□□ -0.33
U2AF1-211ENST00000486519 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
U2AF1-211ENST00000486519 NOX3Q9HBY0 568 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 MMP26Q9NRE1 261 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 PLEK2Q9NYT0 353 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 SNX6Q9UNH7 406 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 CACNG2Q9Y698 323 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 KCNE3Q9Y6H6 103 aa12.96□□□□□ -0.33
U2AF1-211ENST00000486519 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 CENPVL1A0A0U1RR11 272 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 TRIM49D1C9J1S8 452 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 GTPBP1O00178 669 aaKnown RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 PIP5K1BO14986 540 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 RPS17P08708 135 aaKnown RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ANXA4P09525 319 aaPredicted RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 CRABP2P29373 138 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 H3F3AP84243 136 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ALKBH6Q3KRA9 238 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF385BQ569K4 471 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ARMCX4Q5H9R4 360 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 METTL2BQ6P1Q9 378 aaKnown RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF614Q8N883 585 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 COX18Q8N8Q8 333 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 ALKBH3Q96Q83 286 aaPredicted RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 THUMPD3Q9BV44 507 aaKnown RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 GATA5Q9BWX5 397 aaPredicted RBP12.95□□□□□ -0.34
U2AF1-211ENST00000486519 OBP2BQ9NPH6 170 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 TNFRSF19Q9NS68 423 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 C1RLQ9NZP8 487 aa12.95□□□□□ -0.34
U2AF1-211ENST00000486519 DYNC2H1Q8NCM8 4307 aaKnown RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 BCAS1O75363 584 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 PMS2P2O95744 297 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 GSNP06396 782 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 MAGEA8P43361 318 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 OR2B6P58173 313 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 ACSM2AQ08AH3 577 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 DAG1Q14118 895 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 SLC17A1Q14916 467 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 TAF9Q16594 264 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 C3orf36Q3SXR2 165 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 VPS26BQ4G0F5 336 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 GRTP1Q5TC63 336 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 ACSM2BQ68CK6 577 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 CTAGE3PQ8IX95 158 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF483Q8TF39 744 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF416Q9BWM5 594 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 RSPO3Q9BXY4 272 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-211ENST00000486519 SHCBP1LQ9BZQ2 653 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 BEX1Q9HBH7 125 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 MIEF1Q9NQG6 463 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 OXSMQ9NWU1 459 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 NMRK1Q9NWW6 199 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 GRID1Q9ULK0 1009 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 SLC9A8Q9Y2E8 581 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 CMAHPQ9Y471 501 aa12.94□□□□□ -0.34
U2AF1-211ENST00000486519 DNAJA2O60884 412 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
U2AF1-211ENST00000486519 KLHL2O95198 593 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 ALOX5P09917 674 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 IMPDH2P12268 514 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 LCN1P31025 176 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 POU6F2P78424 691 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-211ENST00000486519 ZNF763Q0D2J5 394 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 NPRL3Q12980 569 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 SKP2Q13309 424 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 FAM83EQ2M2I3 478 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 C1QTNF12Q5T7M4 302 aa12.93□□□□□ -0.34
U2AF1-211ENST00000486519 OLIG3Q7RTU3 272 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms