RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	IGHV3-9	P01782	118 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	IGF1	P05019	195 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	WNT2	P09544	360 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CPN1	P15169	458 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	HNF1A	P20823	631 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PAX7	P23759	505 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ELK3	P41970	407 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	NOVA1	P51513	510 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ARHGDIB	P52566	201 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	AIF1	P55008	147 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF33B	Q06732	778 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PUDP	Q08623	228 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	COX10	Q12887	443 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CRMP1	Q14194	572 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ABRAXAS2	Q15018	415 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CHI3L2	Q15782	390 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CCL15	Q16663	113 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	C17orf58	Q2M2W7	97 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	RABL6	Q3YEC7	729 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	BEND3	Q5T5X7	828 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	SEL1L2	Q5TEA6	688 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PYHIN1	Q6K0P9	492 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	RFWD3	Q6PCD5	774 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	STXBP4	Q6ZWJ1	553 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CCDC80	Q76M96	950 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	NBPF5P	Q86XG9	351 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ABHD12	Q8N2K0	398 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF491	Q8N8L2	437 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	C18orf25	Q96B23	403 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	COQ2	Q96H96	371 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	RPRD1A	Q96P16	312 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PSKH2	Q96QS6	385 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	SECISBP2	Q96T21	854 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	SLC6A7	Q99884	636 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	RBM4B	Q9BQ04	359 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PYGO2	Q9BRQ0	406 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	TMEM43	Q9BTV4	400 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	GCOM2	Q9BZD3	368 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ZBP1	Q9H171	429 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	OPN3	Q9H1Y3	402 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	MFSD1	Q9H3U5	465 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	FN3KRP	Q9HA64	309 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	UFSP2	Q9NUQ7	469 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	NUDT15	Q9NV35	164 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	DCAF16	Q9NXF7	216 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PCSK1N	Q9UHG2	260 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	OARD1	Q9Y530	152 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	ALG6	Q9Y672	507 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	RELN	P78509	3460 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	KIF1B	O60333	1816 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	NBEA	Q8NFP9	2946 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	RPL37AP8	A6NKH3	93 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	EPM2A	B3EWF7	344 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024		B4DXG7	233 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	AP3B1	O00203	1094 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	B4GALT2	O60909	372 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	NEBL	O76041	1014 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	B3GAT3	O94766	335 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	CT45A10	P0DMU9	189 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	ACADS	P16219	412 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	XRCC1	P18887	633 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	UQCRC2	P22695	453 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	YWHAB	P31946	246 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	DHPS	P49366	369 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	GSK3B	P49841	420 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	EFNA3	P52797	238 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	IL18R1	Q13478	541 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	LTB4R	Q15722	352 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	SSX2	Q16385	188 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	DPYSL2	Q16555	572 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	NDUFA9	Q16795	377 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	PPP1R3A	Q16821	1122 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	MAJIN	Q3KP22	176 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	BOLA3	Q53S33	107 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	ACSM5	Q6NUN0	579 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	UTS2B	Q765I0	119 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	KIAA1328	Q86T90	577 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	TGIF2LX	Q8IUE1	241 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	SLC22A18AS	Q8N1D0	253 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	LRRC75A-AS1	Q8N1F1	130 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	LRRC43	Q8N309	656 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	MTURN	Q8N3F0	131 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	NECAB1	Q8N987	351 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	CNIH3	Q8TBE1	160 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	MAIP1	Q8WWC4	291 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM3C	Q92520	227 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	RASL10A	Q92737	203 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	TMEM80	Q96HE8	168 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	C12orf66	Q96MD2	445 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	RBM14	Q96PK6	669 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	OR5B2	Q96R09	309 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	TMEM121	Q9BTD3	319 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	HCAR1	Q9BXC0	346 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	NXF5	Q9H1B4	397 aa	Known RBP	3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	GLT8D2	Q9H1C3	349 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	PPDPF	Q9H3Y8	114 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	RHOJ	Q9H4E5	214 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF385D	Q9H6B1	395 aa		3.09	□□□□□ -1.91
VPS8-223	ENST00000485024	SMYD3	Q9H7B4	428 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms