RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TMEM181Q9P2C4 612 aa17.07■□□□□ 0.32
SNX17-206ENST00000484886 ITPR2Q14571 2701 aa17.07■□□□□ 0.32
SNX17-206ENST00000484886 ABCA12Q86UK0 2595 aa17.07■□□□□ 0.32
SNX17-206ENST00000484886 FXYD1O00168 92 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 TPST1O60507 370 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 OPN1SWP03999 348 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 COX4I1P13073 169 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 KLK2P20151 261 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 PCGF2P35227 344 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 MAP2K6P52564 334 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 RGS8P57771 180 aaPredicted RBP17.06■□□□□ 0.32
SNX17-206ENST00000484886 BNIP2Q12982 314 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 INTS11Q5TA45 600 aaKnown RBP17.06■□□□□ 0.32
SNX17-206ENST00000484886 FBXW10Q5XX13 1052 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 NET1Q7Z628 596 aaPredicted RBP17.06■□□□□ 0.32
SNX17-206ENST00000484886 SMYD1Q8NB12 490 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 SLC26A7Q8TE54 656 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 TACO1Q9BSH4 297 aaKnown RBP17.06■□□□□ 0.32
SNX17-206ENST00000484886 KLHL4Q9C0H6 718 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 FANCFQ9NPI8 374 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 PLSCR4Q9NRQ2 329 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 ELOVL5Q9NYP7 299 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
SNX17-206ENST00000484886 ANKHD1Q8IWZ3 2542 aaKnown RBP17.06■□□□□ 0.32
SNX17-206ENST00000484886 ZC3H12DA2A288 527 aaKnown RBP17.05■□□□□ 0.32
SNX17-206ENST00000484886 ELOA3DA6NLF2 546 aaPredicted RBP17.05■□□□□ 0.32
SNX17-206ENST00000484886 AIM2O14862 343 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 CYTIPO60759 359 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 YES1P07947 543 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 DRD4P21917 467 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 IDUAP35475 653 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 SLC35A1P78382 337 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 DMTNQ08495 405 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 VMACQ2NL98 169 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 ELOA3BQ3SY89 546 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 PATL1Q86TB9 770 aaKnown RBP17.05■□□□□ 0.32
SNX17-206ENST00000484886 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 ELOA3Q8NG57 546 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 OR52E4Q8NGH9 312 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 C3orf49Q96BT1 292 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 ZNF775Q96BV0 537 aaPredicted RBP17.05■□□□□ 0.32
SNX17-206ENST00000484886 LURAP1Q96LR2 239 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 GP6Q9HCN6 339 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 SELENONQ9NZV5 590 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 EMC3Q9P0I2 261 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 NDRG3Q9UGV2 375 aa17.05■□□□□ 0.32
SNX17-206ENST00000484886 SH3D21A4FU49 640 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 M0QX08 132 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 SNX3O60493 162 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 MFN2O95140 757 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 EPXP11678 715 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 PCBP3P57721 371 aaKnown RBP17.04■□□□□ 0.32
SNX17-206ENST00000484886 BEND4Q6ZU67 534 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 NUFIP2Q7Z417 695 aaKnown RBP17.04■□□□□ 0.32
SNX17-206ENST00000484886 RANBP3LQ86VV4 465 aaPredicted RBP17.04■□□□□ 0.32
SNX17-206ENST00000484886 PIGXQ8TBF5 258 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 ZNF300Q96RE9 604 aaPredicted RBP17.04■□□□□ 0.32
SNX17-206ENST00000484886 PSD2Q9BQI7 771 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 NAA11Q9BSU3 229 aaPredicted RBP17.04■□□□□ 0.32
SNX17-206ENST00000484886 TAPBPLQ9BX59 468 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 TRIM2Q9C040 744 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 TRAPPC4Q9Y296 219 aa17.04■□□□□ 0.32
SNX17-206ENST00000484886 A8MVM7 634 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 C16orf97H3BN30 126 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 CASKO14936 926 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 DNPH1O43598 174 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 EIF1BO60739 113 aaKnown RBP17.03■□□□□ 0.32
SNX17-206ENST00000484886 GPIP06744 558 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 IMPDH2P12268 514 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 FPR1P21462 350 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 UGT2B10P36537 528 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 CEACAM7Q14002 265 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 OR7A5Q15622 319 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 MED18Q9BUE0 208 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 PRR14Q9BWN1 585 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 RSPO3Q9BXY4 272 aaPredicted RBP17.03■□□□□ 0.32
SNX17-206ENST00000484886 POTEKPQ9BYX7 375 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 BCO1Q9HAY6 547 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 TMEM27Q9HBJ8 222 aa17.03■□□□□ 0.32
SNX17-206ENST00000484886 TESQ9UGI8 421 aaKnown RBP17.03■□□□□ 0.32
SNX17-206ENST00000484886 A0A1B0GWA3 101 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 A6NNC1 897 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 M0R3H8 397 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 HTR2AP28223 471 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 GZMMP51124 257 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 KRTAP10-9P60411 292 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 C1orf140Q5VVS0 124 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ABLIM2Q6H8Q1 611 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ERICH5Q6P6B1 374 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ARPINQ7Z6K5 226 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 GALNT5Q7Z7M9 940 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ATG4DQ86TL0 474 aaPredicted RBP17.02■□□□□ 0.32
SNX17-206ENST00000484886 TREML1Q86YW5 311 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 CCDC103Q8IW40 242 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 ZNF100Q8IYN0 542 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 DACH2Q96NX9 599 aa17.02■□□□□ 0.32
SNX17-206ENST00000484886 GPATCH1Q9BRR8 931 aaKnown RBP17.02■□□□□ 0.32
SNX17-206ENST00000484886 EVA1AQ9H8M9 152 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms