RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CDX2Q99626 313 aaPredicted RBP1.77□□□□□ -2.13
SCAF11-207ENST00000484275 NPAS2Q99743 824 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 SMPD3Q9NY59 655 aaPredicted RBP1.77□□□□□ -2.13
SCAF11-207ENST00000484275 RDH8Q9NYR8 311 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 MTRRQ9UBK8 725 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 SPASTQ9UBP0 616 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 ZNF229Q9UJW7 825 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 BRWD3Q6RI45 1802 aa1.77□□□□□ -2.13
SCAF11-207ENST00000484275 UBE4BO95155 1302 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 IGSF9BQ9UPX0 1349 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 A0A0U1RQV5 110 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 IDSB3KWA1 339 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 BET1O15155 118 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 CA1P00915 261 aaPredicted RBP1.76□□□□□ -2.13
SCAF11-207ENST00000484275 PNMTP11086 282 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 FUT1P19526 365 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 PTGFRP43088 359 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 HSPA2P54652 639 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 CACNG7P62955 275 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 TRIP10Q15642 601 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 CCDC137Q6PK04 289 aaKnown RBP1.76□□□□□ -2.13
SCAF11-207ENST00000484275 C16orf62Q7Z3J2 963 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 BCORP1Q8N888 145 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 Q8N976 141 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 FAM71CQ8NEG0 241 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 RAPGEF5Q92565 580 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 CCDC43Q96MW1 224 aaKnown RBP1.76□□□□□ -2.13
SCAF11-207ENST00000484275 OSBPL11Q9BXB4 747 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 THAP9Q9H5L6 903 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 DHX33Q9H6R0 707 aaKnown RBP1.76□□□□□ -2.13
SCAF11-207ENST00000484275 POLD4Q9HCU8 107 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 CCL28Q9NRJ3 127 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 V9GY05 133 aa1.76□□□□□ -2.13
SCAF11-207ENST00000484275 COL27A1Q8IZC6 1860 aaPredicted RBP1.75□□□□□ -2.13
SCAF11-207ENST00000484275 PDS5BQ9NTI5 1447 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 IGHV2-70DA0A0C4DH43 119 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 A0A0G2JN53 185 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 A0A1B0GUL7 405 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 ANGPTL7O43827 346 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 MT-ATP6P00846 226 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 CXCR2P25025 360 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 EWSR1Q01844 656 aaKnown RBP eCLIP1.75□□□□□ -2.13
SCAF11-207ENST00000484275 REG3AQ06141 175 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 ARL6IP1Q15041 203 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 PDK1Q15118 436 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 C12orf60Q5U649 245 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 TMEM17Q86X19 198 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 CBWD2Q8IUF1 395 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 ELMOD2Q8IZ81 293 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 KIR3DL3Q8N743 410 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 LINC00304Q8N9R0 145 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 OR6C4Q8NGE1 309 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 OR9G1Q8NH87 305 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 GIPC3Q8TF64 312 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 RPL3LQ92901 407 aaKnown RBP1.75□□□□□ -2.13
SCAF11-207ENST00000484275 NAT10Q9H0A0 1025 aaKnown RBP1.75□□□□□ -2.13
SCAF11-207ENST00000484275 C20orf85Q9H1P6 137 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 IFI27L2Q9H2X8 130 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 ZNF385DQ9H6B1 395 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 CALHM2Q9HA72 323 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 SOHLH2Q9NX45 425 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 SPACA6W5XKT8 324 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 ITGB4P16144 1822 aa1.75□□□□□ -2.13
SCAF11-207ENST00000484275 FAM230AA0A1W2PPH8 454 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 CD5LO43866 347 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 JAK2O60674 1132 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TOM1L1O75674 476 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TGFAP01135 160 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 CISD3P0C7P0 127 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TSPY4P0CV99 314 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TSPY10P0CW01 314 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 PNMA6AP0CW24 399 aaPredicted RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 PAICSP22234 425 aaKnown RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 CD34P28906 385 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 BTCP35070 178 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 CXCL5P42830 114 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 VDAC2P45880 294 aaPredicted RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 KPNA2P52292 529 aaKnown RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 RPS14P62263 151 aaKnown RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 AP1B1Q10567 949 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 GRB7Q14451 532 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TMEM255AQ5JRV8 349 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TMIGD1Q6UXZ0 262 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 RDH10Q8IZV5 341 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 PNPT1Q8TCS8 783 aaKnown RBP1.74□□□□□ -2.13
SCAF11-207ENST00000484275 ST8SIA1Q92185 356 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 FCRL1Q96LA6 429 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 TAAR1Q96RJ0 339 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 SLC6A7Q99884 636 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 NAT9Q9BTE0 207 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 SPNS1Q9H2V7 528 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 IL19Q9UHD0 177 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 GGA2Q9UJY4 613 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 PLA2R1Q13018 1463 aa1.74□□□□□ -2.13
SCAF11-207ENST00000484275 IGHV1OR21-1A0A087WYE8 117 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 FAM170AA1A519 330 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 SUPT3HO75486 399 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 CCDC192P0DO97 292 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 ETS1P14921 441 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 HLA-DPA1P20036 260 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms