RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TMEM229AB2RXF0 380 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 FRS3O43559 492 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 FESP07332 822 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 TFPIP10646 304 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 COX4I1P13073 169 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 AQP1P29972 269 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 CD79BP40259 229 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 GYS2P54840 703 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 H3F3AP84243 136 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 TLE4Q04727 773 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 PDK3Q15120 406 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 VMACQ2NL98 169 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 CCDC80Q76M96 950 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 PATL1Q86TB9 770 aaKnown RBP16.04■□□□□ 0.16
HDAC6-225ENST00000483506 ATG4DQ86TL0 474 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-225ENST00000483506 TREML1Q86YW5 311 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 CADM2Q8N3J6 435 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 RCN3Q96D15 328 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 POTEKPQ9BYX7 375 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 C12orf10Q9HB07 376 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 TMEM181Q9P2C4 612 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 MPDZO75970 2070 aa16.04■□□□□ 0.16
HDAC6-225ENST00000483506 PDZD2O15018 2839 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 IGKV3D-15A0A087WSY6 115 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 IGHV3-15A0A0B4J1V0 119 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ZC3H12DA2A288 527 aaKnown RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 FAM221AA4D161 298 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 TUBAL3A6NHL2 446 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF724A8MTY0 619 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 NPIPB7O75200 414 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 C8BP07358 591 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 YES1P07947 543 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 KLK2P20151 261 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 CXCR1P25024 350 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 HTR2AP28223 471 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 CPOXP36551 454 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 GNGT1P63211 74 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 DAZAP2Q15038 168 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 GLIPR1L2Q4G1C9 344 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 INTS11Q5TA45 600 aaKnown RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 TUSC5Q8IXB3 177 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF610Q8N9Z0 462 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ZHX1-C8orf76Q96EF9 292 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF583Q96ND8 569 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 ECSITQ9BQ95 431 aa16.03■□□□□ 0.16
HDAC6-225ENST00000483506 GPATCH1Q9BRR8 931 aaKnown RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 TESQ9UGI8 421 aaKnown RBP16.03■□□□□ 0.16
HDAC6-225ENST00000483506 A8MVM7 634 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 M0QX08 132 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 FZD7O75084 574 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 LGI1O95970 557 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 EPXP11678 715 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 IMPDH2P12268 514 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 CCNA2P20248 432 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 CCKARP32238 428 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 CRYBA2P53672 197 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 SLC16A1P53985 500 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 SLC35A1P78382 337 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 HOXC5Q00444 222 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 FAM27E3Q08E93 113 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 RASGEF1BQ0VAM2 473 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 VEZF1Q14119 521 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 C8orf82Q6P1X6 216 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-225ENST00000483506 ERICH5Q6P6B1 374 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 HACD2Q6Y1H2 254 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 CPLX4Q7Z7G2 160 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 DACH2Q96NX9 599 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 ARHGDIGQ99819 225 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 TRIM2Q9C040 744 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 FAM107BQ9H098 131 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 KLHL28Q9NXS3 571 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 AP3M1Q9Y2T2 418 aa16.02■□□□□ 0.16
HDAC6-225ENST00000483506 POLQO75417 2590 aa16.02■□□□□ 0.15
HDAC6-225ENST00000483506 CSMD2Q7Z408 3487 aa16.02■□□□□ 0.15
HDAC6-225ENST00000483506 ZNF716A6NP11 495 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 FAM220BPB1ANY3 271 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 EIF1BO60739 113 aaKnown RBP16.01■□□□□ 0.15
HDAC6-225ENST00000483506 FMO6PO60774 539 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 GOSR1O95249 250 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 POU2F1P14859 743 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 CD247P20963 164 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 UGT2B10P36537 528 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 KCNJ5P48544 419 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 RGS8P57771 180 aaPredicted RBP16.01■□□□□ 0.15
HDAC6-225ENST00000483506 NRF1Q16656 503 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 DUSP7Q16829 419 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 FAM91A1Q658Y4 838 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 PAQR6Q6TCH4 344 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 TFAP2EQ6VUC0 442 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 NUFIP2Q7Z417 695 aaKnown RBP16.01■□□□□ 0.15
HDAC6-225ENST00000483506 ARPINQ7Z6K5 226 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 PIGWQ7Z7B1 504 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 SMYD1Q8NB12 490 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 GPR32P1Q8NGA4 272 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 LINC01560Q8TB33 94 aa16.01■□□□□ 0.15
HDAC6-225ENST00000483506 PIGXQ8TBF5 258 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms