RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 NOS3P29474 1203 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 EVI2BP34910 448 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 EFR3AQ14156 821 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF846Q147U1 533 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 PAPD4Q6PIY7 484 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CPEB2Q7Z5Q1 589 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MFSD4AQ8N468 514 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 KLHL36Q8N4N3 616 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 OR51G2Q8NGK0 314 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 OR5W2Q8NH69 310 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MCFD2Q8NI22 146 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 GATAD2BQ8WXI9 593 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ERMAPQ96PL5 475 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 CDADC1Q9BWV3 514 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 INPP5EQ9NRR6 644 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 B3GNT3Q9Y2A9 372 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 NPFFR2Q9Y5X5 522 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 SPIN1Q9Y657 262 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-225ENST00000483495 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.48
CPNE1-225ENST00000483495 MYO15AQ9UKN7 3530 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 TMEM200CA6NKL6 621 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 WWP2O00308 870 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 IDH3BO43837 385 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 CDC40O60508 579 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPNE1-225ENST00000483495 TSPAN19P0C672 248 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 PGCP20142 388 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 ACP1P24666 158 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 TACR3P29371 465 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 IDUAP35475 653 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 ATP6V1E1P36543 226 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 CD79BP40259 229 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 GRK6P43250 576 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 MC2RQ01718 297 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 ANKDD1AQ495B1 522 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 ACBD7Q8N6N7 88 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 NACC2Q96BF6 587 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 TRMT61AQ96FX7 289 aaKnown RBP12.07□□□□□ -0.48
CPNE1-225ENST00000483495 DDOQ99489 341 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 LPAR4Q99677 370 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 CTRCQ99895 268 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 CRB3Q9BUF7 120 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 MMP25Q9NPA2 562 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 RXFP3Q9NSD7 469 aa12.07□□□□□ -0.48
CPNE1-225ENST00000483495 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
CPNE1-225ENST00000483495 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-225ENST00000483495 ASCC3Q8N3C0 2202 aaKnown RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ZC3H12DA2A288 527 aaKnown RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF670-ZNF695F2Z2N8 137 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ASAH2BP0C7U1 165 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 NAGAP17050 411 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 MPLP40238 635 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 P2RX1P51575 399 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 SLC26A5P58743 744 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 BDH1Q02338 343 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 CBFBQ13951 182 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 LPAL2Q16609 132 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 FCRLBQ6BAA4 426 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF322Q6U7Q0 402 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 PRR23CQ6ZRP0 262 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 MISPQ8IVT2 679 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 RNF138Q8WVD3 245 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 UFD1Q92890 307 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 LOXL4Q96JB6 756 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 TIMP4Q99727 224 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 SMOC1Q9H4F8 434 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 C19orf25Q9UFG5 118 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 SSR3Q9UNL2 185 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 IER3IP1Q9Y5U9 82 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 C12orf71A8MTZ7 269 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 J3QRK9 145 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 AKAP8O43823 692 aaKnown RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 LDOC1O95751 146 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 BMP4P12644 408 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 APEHP13798 732 aaKnown RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 GABRA5P31644 462 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 POU4F2Q12837 409 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 TOMM34Q15785 309 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 KLHL12Q53G59 568 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 CD200R1LQ6Q8B3 271 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 B3GLCTQ6Y288 498 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 OR52E2Q8NGJ4 325 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 MOGAT1Q96PD6 335 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ASPNQ9BXN1 380 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 OR51V1Q9H2C8 321 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-225ENST00000483495 ADGRL4Q9HBW9 690 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 NANSQ9NR45 359 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 PCDHGB6Q9Y5F9 930 aa12.06□□□□□ -0.48
CPNE1-225ENST00000483495 LOC102723996A0A087X1L8 192 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms