RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 CXCR1P25024 350 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 IFNA8P32881 189 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 TPD52P55327 224 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 CLDN20P56880 219 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 TRIP10Q15642 601 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZNF585AQ6P3V2 769 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 GDF7Q7Z4P5 450 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 CENPNQ96H22 339 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 POLR2J2Q9GZM3 115 aaKnown RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 ADAM19Q9H013 955 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 POLR2J3Q9H1A7 115 aaKnown RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 NMNAT1Q9HAN9 279 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 STOML1Q9UBI4 398 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 CHRNA9Q9UGM1 479 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 TMED7Q9Y3B3 224 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 LYVE1Q9Y5Y7 322 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 AP4B1Q9Y6B7 739 aa17.95■□□□□ 0.46
TRAPPC12-220ENST00000482645 A0A0B4J2E0 115 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 A0A1B0GX12 115 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ELOA3DA6NLF2 546 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 TNFRSF11BO00300 401 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 EIF1AYO14602 144 aaKnown RBP17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 PRRG2O14669 202 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 TFPIP10646 304 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZNF23P17027 643 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 GNLYP22749 145 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 SHC1P29353 583 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 UQCRFS1P47985 274 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 RAC1P63000 192 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 LAPTM4AQ15012 233 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ELOA3BQ3SY89 546 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 TMEM176BQ3YBM2 270 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 GXYLT1Q4G148 440 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZNF613Q6PF04 617 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 C3P1Q6ZMU1 363 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ADGRG3Q86Y34 549 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 GALNT11Q8NCW6 608 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 ELOA3Q8NG57 546 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 FAM57AQ8TBR7 257 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 WDYHV1Q96HA8 205 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 NTN4Q9HB63 628 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 MAN2C1Q9NTJ4 1040 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 TINAGQ9UJW2 476 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 OSGIN2Q9Y236 505 aa17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 SPIN1Q9Y657 262 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC12-220ENST00000482645 TMEM72A0PK05 275 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 THY1P04216 161 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZNF708P17019 499 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 SUCLG1P53597 346 aaKnown RBP17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 CLDN18P56856 261 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 ST3GAL3Q11203 375 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 EXOC3L2Q2M3D2 409 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 ULK3Q6PHR2 472 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 ATG4DQ86TL0 474 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 MEIOBQ8N635 442 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 PIK3C3Q8NEB9 887 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 DNAJA4Q8WW22 397 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 DHRS1Q96LJ7 313 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 EPYCQ99645 322 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 OR11A1Q9GZK7 315 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 OAZ3Q9UMX2 235 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 TRGV8A0A0C4DH27 118 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 TRBV4-1A0A0J9YWV2 114 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 TNFSF11O14788 317 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 PEX2P28328 305 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 DLX5P56178 289 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 TRAM2Q15035 370 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 EIF2S3LQ2VIR3 472 aaKnown RBP17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 SYT14P1Q58G82 188 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 PPP4R4Q6NUP7 873 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 TMEM179BQ7Z7N9 219 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 PM20D2Q8IYS1 436 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 PRR7Q8TB68 274 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 KLHL15Q96M94 604 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 OR5B2Q96R09 309 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 CIB1Q99828 191 aa17.93■□□□□ 0.46
TRAPPC12-220ENST00000482645 A0A1W2PNR3 127 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 GJE1A6NN92 205 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 CHP2O43745 196 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 FPR1P21462 350 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 DNAJA1P31689 397 aaKnown RBP17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 EIF1AXP47813 144 aaKnown RBP17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 CASP6P55212 293 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 SMIM11AP58511 58 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 SNCBQ16143 134 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 LPCAT4Q643R3 524 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 CHMP1BQ7LBR1 199 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 GGNQ86UU5 652 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 EPHX4Q8IUS5 362 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 P3H2Q8IVL5 708 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 NKAIN4Q8IVV8 208 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 HS3ST5Q8IZT8 346 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 OR4C15Q8NGM1 316 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 DDIT4LQ96D03 193 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 ALPK1Q96QP1 1244 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 PRDM14Q9GZV8 571 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZNF835Q9Y2P0 537 aa17.92■□□□□ 0.46
TRAPPC12-220ENST00000482645 A0A1W2PRQ8 180 aa17.91■□□□□ 0.46
TRAPPC12-220ENST00000482645 ZC3H12DA2A288 527 aaKnown RBP17.91■□□□□ 0.46
TRAPPC12-220ENST00000482645 LYPD3O95274 346 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms