RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CLEC2DQ9UHP7 191 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 PPIAL4AQ9Y536 164 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
SMC6-208ENST00000481708 ZFHX2Q9C0A1 2572 aaPredicted RBP2.88□□□□□ -1.95
SMC6-208ENST00000481708 MYO9BQ13459 2157 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ERICH2A1L162 156 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 FAM74A7A6NL05 159 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SERPINE3A8MV23 424 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 GOLGA8RI6L899 631 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 GPR171O14626 319 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 DVL1O14640 695 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 LSM1O15116 133 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 RBBP9O75884 186 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 VAMP5O95183 116 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 PRKAR1AP10644 381 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 MSR1P21757 451 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 CEACAM3P40198 252 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 RPL34P49207 117 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 B2MP61769 119 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 GUCY1B3Q02153 619 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 CTF1Q16619 201 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 MOGAT2Q3SYC2 334 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 FAM74A3Q4VXF1 159 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 HIST2H2AA3Q6FI13 130 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 RTL6Q6ICC9 239 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 DPY19L2P2Q6ZN68 376 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 LANCL3Q6ZV70 420 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 PIWIL4Q7Z3Z4 852 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 CYP4Z1Q86W10 505 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 DCUN1D3Q8IWE4 304 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 EID3Q8N140 333 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SYT14Q8NB59 555 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 OR56A4Q8NGH8 313 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 THAP6Q8TBB0 222 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 PIK3R3Q92569 461 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SLC38A4Q969I6 547 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SEMA4CQ9C0C4 833 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 POMKQ9H5K3 350 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 STOX2Q9P2F5 926 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 MUTYHQ9UIF7 546 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 STK36Q9NRP7 1315 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SMG1Q96Q15 3661 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 A8MVM7 634 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ZNF814B7Z6K7 855 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 CDX4O14627 284 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 ENTPD5O75356 428 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 POLR2CP19387 275 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 SLC7A2P52569 658 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 NME3Q13232 169 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 PMS2P3Q13401 168 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 AGAP7PQ5VUJ5 663 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 STEAP1BQ6NZ63 245 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ADAMTSL5Q6ZMM2 481 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SLC29A4Q7RTT9 530 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 TMEM219Q86XT9 240 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 UEVLDQ8IX04 471 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 WFIKKN2Q8TEU8 576 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ASB5Q8WWX0 329 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 NR4A3Q92570 626 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 LRRC45Q96CN5 670 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 PDLIM2Q96JY6 352 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 AGAP4Q96P64 663 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 TRAF4Q9BUZ4 470 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 IL22Q9GZX6 179 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 SDCBP2Q9H190 292 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 POLR3FQ9H1D9 316 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 PNO1Q9NRX1 252 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 AURKAIP1Q9NWT8 199 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 WWOXQ9NZC7 414 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ZCWPW2A0A1B0GU75 182 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ARPC1BO15143 372 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 LCKP06239 509 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 GP1BBP13224 206 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ARL2P36404 184 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 NAA10P41227 235 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 CRATP43155 626 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 CDC34P49427 236 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 NOVA1P51513 510 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 CCNG1P51959 295 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 NAPAP54920 295 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 TPM4P67936 248 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 MRPS15P82914 257 aaKnown RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 KLRB1Q12918 225 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 LRRC37A5PQ49AS3 106 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 DCAF10Q5QP82 559 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 OTUD3Q5T2D3 398 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 HACD2Q6Y1H2 254 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 DEF8Q6ZN54 512 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 Q71RC1 249 aaPredicted RBP2.87□□□□□ -1.95
SMC6-208ENST00000481708 TMEM150AQ86TG1 271 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 CMTM8Q8IZV2 173 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 MLKLQ8NB16 471 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 OR52I1Q8NGK6 324 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 UPRTQ96BW1 309 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 URB1-AS1Q96HZ7 61 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 ART5Q96L15 291 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 IL4I1Q96RQ9 567 aa2.87□□□□□ -1.95
SMC6-208ENST00000481708 TSSK1BQ9BXA7 367 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms