RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PRSS27Q9BQR3 290 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 EVA1AQ9H8M9 152 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 NDUFAF4Q9P032 175 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 CHRNA9Q9UGM1 479 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 SH3BGRL2Q9UJC5 107 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 RPS6KA6Q9UK32 745 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 SLC13A4Q9UKG4 626 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 PRDM4Q9UKN5 801 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 MED13LQ71F56 2210 aa10.98□□□□□ -0.65
TRA2B-212ENST00000480461 GTF3C1Q12789 2109 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ZGRF1Q86YA3 2104 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 A0A1W2PNR3 127 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 TNFSF11O14788 317 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 SEC14L5O43304 696 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 NPIPB7O75200 414 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 TOXO94900 526 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 DIRAS1O95057 198 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ELK4P28324 431 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 CA7P43166 264 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 HTR3AP46098 478 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ERFP50548 548 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 COPZ1P61923 177 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 LSM11P83369 360 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ULK3Q6PHR2 472 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 RPTNQ6XPR3 784 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 DEF8Q6ZN54 512 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 NKAIN4Q8IVV8 208 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ZPLD1Q8TCW7 415 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 LZICQ8WZA0 190 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 OSTF1Q92882 214 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 DMRTA2Q96SC8 542 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 SRXN1Q9BYN0 137 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 COQ10BQ9H8M1 238 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 TMEM27Q9HBJ8 222 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 MAN2C1Q9NTJ4 1040 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 RHCGQ9UBD6 479 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 TESQ9UGI8 421 aaKnown RBP10.97□□□□□ -0.65
TRA2B-212ENST00000480461 RIMS3Q9UJD0 308 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 ITGB1BP2Q9UKP3 347 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 SLC9A8Q9Y2E8 581 aa10.97□□□□□ -0.65
TRA2B-212ENST00000480461 A0A087WUJ7 227 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 TRGV8A0A0C4DH27 118 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 TRAPPC13A5PLN9 417 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 hCG_2039718K7EN88 272 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 EIF1AYO14602 144 aaKnown RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 PRRG2O14669 202 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 CXCL13O43927 109 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 GMNNO75496 209 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 TGM6O95932 706 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 IMPDH2P12268 514 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 UQCRBP14927 111 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 PTNP21246 168 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 CXCR1P25024 350 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ACVR2AP27037 513 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 PTGER4P35408 488 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 RBPJQ06330 500 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 LTBQ06643 244 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 FOXD4Q12950 439 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 MYBPHQ13203 477 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SELENBP1Q13228 472 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 TESK1Q15569 626 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ACSF3Q4G176 576 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SYT14P1Q58G82 188 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ALG10BQ5I7T1 473 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ZNF613Q6PF04 617 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 YTHDF3Q7Z739 585 aaKnown RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 RANBP3LQ86VV4 465 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ADGRG5Q8IZF4 528 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 OR10D3Q8NH80 312 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 CANT1Q8WVQ1 401 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 DNAJA4Q8WW22 397 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 GEMIN6Q8WXD5 167 aaKnown RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 MCUR1Q96AQ8 359 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SLCO4A1Q96BD0 722 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 KTI12Q96EK9 354 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 DTNBP1Q96EV8 351 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 KLHL15Q96M94 604 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SEPHS2Q99611 448 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 MMADHCQ9H3L0 296 aaPredicted RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 MUC13Q9H3R2 512 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SERINC1Q9NRX5 453 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SLC7A7Q9UM01 511 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 SAMD4AQ9UPU9 718 aaKnown RBP10.96□□□□□ -0.65
TRA2B-212ENST00000480461 ENPP4Q9Y6X5 453 aa10.96□□□□□ -0.65
TRA2B-212ENST00000480461 PCNX1Q96RV3 2341 aa10.96□□□□□ -0.66
TRA2B-212ENST00000480461 KIAA1549Q9HCM3 1950 aa10.96□□□□□ -0.66
TRA2B-212ENST00000480461 TCRBV3S1A0A5B6 114 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 CLCA1A8K7I4 914 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 ZNF814B7Z6K7 855 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 ZNF208O43345 1280 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 AQP8O94778 261 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 MT-ND1P03886 318 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 IFNW1P05000 195 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 GLI4P10075 376 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 ENPP1P22413 925 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 CARD18P57730 90 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 PMPCAQ10713 525 aa10.95□□□□□ -0.66
TRA2B-212ENST00000480461 CCNIQ14094 377 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms