RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 TPSD1Q9BZJ3 242 aa11.2□□□□□ -0.62
PTPRF-212ENST00000477970 UBQLN4Q9NRR5 601 aa11.2□□□□□ -0.62
PTPRF-212ENST00000477970 PAIP2BQ9ULR5 123 aaKnown RBP11.2□□□□□ -0.62
PTPRF-212ENST00000477970 SIRT4Q9Y6E7 314 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-212ENST00000477970 OGG1O15527 345 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 NRG3P56975 720 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CD300CQ08708 224 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 FAAH2Q6GMR7 532 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 RDH10Q8IZV5 341 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ZNF614Q8N883 585 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 OR10H4Q8NGA5 316 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 PGLYRP3Q96LB9 341 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 DEPDC7Q96QD5 511 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 MRTO4Q9UKD2 239 aaKnown RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 OR10H1Q9Y4A9 318 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 IGKV3-11P04433 115 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 NOS3P29474 1203 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 GFERP55789 205 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 LGALS3BPQ08380 585 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 SKP2Q13309 424 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 UBXN2BQ14CS0 331 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CDONQ4KMG0 1287 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 KLHL12Q53G59 568 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 NRARPQ7Z6K4 114 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ATG4DQ86TL0 474 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 KMT5CQ86Y97 462 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 C1orf210Q8IVY1 113 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 SPEM1Q8N4L4 309 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 OR5M3Q8NGP4 307 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 OR14A16Q8NHC5 309 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 RPS4Y2Q8TD47 263 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CUTCQ9NTM9 273 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ST6GALNAC2Q9UJ37 374 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ZC3H12DA2A288 527 aaKnown RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 TMEM127O75204 238 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 SERPINA3P01011 423 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 PTNP21246 168 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CCDC58Q4VC31 144 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 TRILQ7L0X0 811 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 MAML2Q8IZL2 1156 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 OR4C3Q8NH37 302 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 NACC2Q96BF6 587 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 TGM7Q96PF1 710 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ERMAPQ96PL5 475 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 SPRTNQ9H040 489 aaPredicted RBP11.19□□□□□ -0.62
PTPRF-212ENST00000477970 SOHLH2Q9NX45 425 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 ITGB1BP2Q9UKP3 347 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
PTPRF-212ENST00000477970 IGKV1D-42A0A075B6H8 117 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TRAV1-2A0A0B4J238 106 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 A0A1B0GTQ1 180 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 C2orf92A0A1B0GVN3 265 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 C17orf105B2RV13 164 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TO15178 435 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 NUDT21O43809 227 aaKnown RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 HYAL3O43820 417 aaPredicted RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TMCC2O75069 709 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CD8BP10966 210 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 RORAP35398 523 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 HTR3AP46098 478 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 DIO1P49895 249 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 ERV3-1Q14264 604 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 GATAD2AQ86YP4 633 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 RAB43Q86YS6 212 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 PHYHIPQ92561 330 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CNN2Q99439 309 aaKnown RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 ZCCHC4Q9H5U6 513 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 MOV10Q9HCE1 1003 aaKnown RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 A0A1W2PQD3 144 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TMEM150CB9EJG8 249 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CDC123O75794 336 aaPredicted RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 PIAS2O75928 621 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TXNDC12O95881 172 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 SLC25A1P53007 311 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TPTEP56180 551 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 OR2B6P58173 313 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 RPS7P62081 194 aaKnown RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 HSD11B2P80365 405 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 ZNF517Q6ZMY9 492 aaPredicted RBP11.18□□□□□ -0.62
PTPRF-212ENST00000477970 PRSS42Q7Z5A4 293 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 D2HGDHQ8N465 521 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 CELF2-AS1Q8N7Q2 184 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 C4orf36Q96KX1 117 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 ART5Q96L15 291 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 OR51V1Q9H2C8 321 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 TIGARQ9NQ88 270 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 INIPQ9NRY2 104 aa11.18□□□□□ -0.62
PTPRF-212ENST00000477970 REM1O75628 298 aa11.17□□□□□ -0.62
PTPRF-212ENST00000477970 UBL4AP11441 157 aa11.17□□□□□ -0.62
PTPRF-212ENST00000477970 HIST1H1CP16403 213 aaKnown RBP11.17□□□□□ -0.62
PTPRF-212ENST00000477970 NBL1P41271 181 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms