RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 B3GALT5Q9Y2C3 310 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 ANGPTL3Q9Y5C1 460 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 A0A096LPK6 155 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 FAM234BA2RU67 622 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GOLGA6L10A6NI86 522 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 MYO1GB0I1T2 1018 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF814B7Z6K7 855 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TNFSF11O14788 317 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ADAMDEC1O15204 470 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 EIF3HO15372 352 aaKnown RBP eCLIP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 SLC16A6O15403 523 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 CLOCKO15516 846 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 RAD51CO43502 376 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TMCC2O75069 709 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TUSC2O75896 110 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 KLHL2O95198 593 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 RPS17P08708 135 aaKnown RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 PPP3CBP16298 524 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 IL12BP29460 328 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 DEKP35659 375 aaKnown RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 MAP3K8P41279 467 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 MAGEA12P43365 314 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 CCNG1P51959 295 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 PHEXP78562 749 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GANABQ14697 944 aaKnown RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TMEM249Q2WGJ8 235 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TMEM95Q3KNT9 176 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GGTA1PQ4G0N0 100 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 C6orf163Q5TEZ5 329 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TFAP2EQ6VUC0 442 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 B3GLCTQ6Y288 498 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 RINLQ6ZS11 566 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 IL17RELQ6ZVW7 336 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 CHMP1BQ7LBR1 199 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 PAGE2Q7Z2X7 111 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TBC1D1Q86TI0 1168 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 DTX2Q86UW9 622 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 EXOC3L1Q86VI1 746 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GBP7Q8N8V2 638 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ANKRD42Q8N9B4 389 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 FBXO25Q8TCJ0 367 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 C16orf78Q8WTQ4 265 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ABHD3Q8WU67 409 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ROBO4Q8WZ75 1007 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 DPF1Q92782 380 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 EXOSC8Q96B26 276 aaKnown RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 REPS1Q96D71 796 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 APIPQ96GX9 242 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GMPPAQ96IJ6 420 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 ERP44Q9BS26 406 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 SRXN1Q9BYN0 137 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 TMEM185BQ9H7F4 350 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 PPCSQ9HAB8 311 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
CKS1B-207ENST00000477676 VDAC3Q9Y277 283 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 LRCH1Q9Y2L9 728 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 RNF115Q9Y4L5 304 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 AP4B1Q9Y6B7 739 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
CKS1B-207ENST00000477676 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 A0A1W2PRB8 838 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SYCE1LA8MT33 242 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 A8MT66 165 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 E7EQL1 145 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 STX16-NPEPL1H3BU86 382 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 UPK1AO00322 258 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 MANBAO00462 879 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 STX16O14662 325 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SSX4O60224 188 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SLC43A1O75387 559 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 LY6HO94772 140 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 OR4F21O95013 312 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 UTS2O95399 124 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ANGPTL1O95841 491 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 IFNA2P01563 188 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 HNRNPCP07910 306 aaKnown RBP eCLIP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 IGHV4-31P0DP07 118 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TCP1P17987 556 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 IGFBP5P24593 272 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 HSD17B3P37058 310 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 MAGEA4P43358 317 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 CCT5P48643 541 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 PLTPP55058 493 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 FOXG1P55316 489 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 EEFSECP57772 596 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 RPS3AP61247 264 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 TRA2BP62995 288 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 VLDLRP98155 873 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 LOXL1Q08397 574 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 SPOCK1Q08629 439 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF155Q12901 538 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 CSTF3Q12996 717 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 IFT88Q13099 833 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 FGFBP1Q14512 234 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 P2RY6Q15077 328 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ETFDHQ16134 617 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 ZNF239Q16600 458 aaKnown RBP4.02□□□□□ -1.77
CKS1B-207ENST00000477676 FAM83EQ2M2I3 478 aa4.02□□□□□ -1.77
CKS1B-207ENST00000477676 PLPPR5Q32ZL2 321 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms