RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SLC35A1P78382 337 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 CAPRIN1Q14444 709 aaKnown RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 GTDC1Q4AE62 458 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 TIMM23BQ5SRD1 257 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 FBXW9Q5XUX1 488 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 DNAJC14Q6Y2X3 702 aaPredicted RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 SSX8Q7RTT4 187 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 YTHDF3Q7Z739 585 aaKnown RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 P2RY8Q86VZ1 359 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 VRK2Q86Y07 508 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 CCDC103Q8IW40 242 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 ZNF440Q8IYI8 595 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 MIER2Q8N344 545 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 ZNF433Q8N7K0 673 aaPredicted RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 OR9I1Q8NGQ6 314 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 OR52P1PQ8NH57 321 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 PIGXQ8TBF5 258 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 SLC38A5Q8WUX1 472 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 TMEM171Q8WVE6 324 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 GTF2H4Q92759 462 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 VPS33AQ96AX1 596 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 DDIT4LQ96D03 193 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 DNAJA3Q96EY1 480 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 C7orf26Q96N11 449 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 POTEKPQ9BYX7 375 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 THUMPD1Q9NXG2 353 aaKnown RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 CALML5Q9NZT1 146 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 P2RX2Q9UBL9 471 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 NOSIPQ9Y314 301 aaKnown RBP9.54□□□□□ -0.88
SEC13-214ENST00000476597 RNF115Q9Y4L5 304 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 USH1CQ9Y6N9 552 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 PRR14LQ5THK1 2151 aa9.54□□□□□ -0.88
SEC13-214ENST00000476597 A0A0G2JPF8 293 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 HNRNPCL2B2RXH8 293 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 HNRNPCL3B7ZW38 293 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 HNRNPCL1O60812 293 aaKnown RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 RAMP1O60894 148 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 MRPL33O75394 65 aaKnown RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 DANCRP0C864 163 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 GKN3PP0CG01 181 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 HNRNPCL4P0DMR1 293 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 UQCRBP14927 111 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 GGT1P19440 569 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 ADSLP30566 484 aaPredicted RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 CRISP3P54108 245 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 DSTNP60981 165 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 PPA1Q15181 289 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 RGNQ15493 299 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 ZSWIM7Q19AV6 140 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 LIN52Q52LA3 116 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 ZNF836Q6ZNA1 936 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 ATG4DQ86TL0 474 aaPredicted RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 CLIP4Q8N3C7 705 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 APH1AQ96BI3 265 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 MUCL1Q96DR8 90 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 AURKBQ96GD4 344 aaPredicted RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 COX4I2Q96KJ9 171 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 Q96MF0 132 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 NAA11Q9BSU3 229 aaPredicted RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 BDH2Q9BUT1 245 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 PAIP1Q9H074 479 aaKnown RBP9.53□□□□□ -0.88
SEC13-214ENST00000476597 CXorf56Q9H5V9 222 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 ZNF232Q9UNY5 417 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 LAMP3Q9UQV4 416 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 CHST2Q9Y4C5 530 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 PCDHB14Q9Y5E9 798 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 HEATR5AQ86XA9 2040 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
SEC13-214ENST00000476597 DNHD1Q96M86 4753 aa9.52□□□□□ -0.88
SEC13-214ENST00000476597 JMJD1CQ15652 2540 aa9.52□□□□□ -0.88
SEC13-214ENST00000476597 ZC3H12DA2A288 527 aaKnown RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 OR5H1A6NKK0 313 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 FAM171A2A8MVW0 826 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 H7C1Q1 480 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 OVOL3O00110 214 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 CLIC1O00299 241 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 CLOCKO15516 846 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 IGHV3-9P01782 118 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 BCHEP06276 602 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 THBS1P07996 1170 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SOD3P08294 240 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 NUDT7P0C024 238 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 BMP2P12643 396 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 HOXB9P17482 250 aaPredicted RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 CXCR1P25024 350 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 IDH3AP50213 366 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 COPZ1P61923 177 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 LTBQ06643 244 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SLC17A1Q14916 467 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 STK11Q15831 433 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 ZNF672Q499Z4 452 aaPredicted RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 C6orf10Q5SRN2 563 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 RNF220Q5VTB9 566 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 WBP2NLQ6ICG8 309 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SLC2A7Q6PXP3 512 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 PAQR6Q6TCH4 344 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 CLEC9AQ6UXN8 241 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms