RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LRRN3E7EW58 273 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 GABRPO00591 440 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 LRRTM2O43300 516 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 RNF13O43567 381 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 PLPP2O43688 288 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ICOSLGO75144 302 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 SC5DO75845 299 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 HLA-DPB1P04440 258 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 CYC1P08574 325 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ASAH2BP0C7U1 165 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 CLUP10909 449 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 HIST1H1CP16403 213 aaKnown RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 UQCRC1P31930 480 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 TNFSF8P32971 234 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 BCAP31P51572 246 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 TAS2R43P59537 309 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ZNF117Q03924 483 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 EGR4Q05215 589 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 TRAM1Q15629 374 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 NSDHLQ15738 373 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 C1orf189Q5VU69 101 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 TMEM91Q6ZNR0 172 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 SLC29A4Q7RTT9 530 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 FAM122BQ7Z309 247 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ZNF554Q86TJ5 538 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 GATAD2AQ86YP4 633 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 GPALPP1Q8IXQ4 340 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 LRRC17Q8N6Y2 441 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 POMGNT2Q8NAT1 580 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 SYT14Q8NB59 555 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 NPEPL1Q8NDH3 523 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 NFAM1Q8NET5 270 aaPredicted RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 ABTB1Q969K4 478 aaPredicted RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 TP53INP1Q96A56 240 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ZNF524Q96C55 264 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 OMA1Q96E52 524 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 C1GALT1C1Q96EU7 318 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 KCNS3Q9BQ31 491 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 SLC30A2Q9BRI3 323 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 KATNB1Q9BVA0 655 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 RTN4RQ9BZR6 473 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 MIXL1Q9H2W2 232 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 LRRN3Q9H3W5 708 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ISG20L2Q9H9L3 353 aaKnown RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 MMP25Q9NPA2 562 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 SNTG1Q9NSN8 517 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 COPS7AQ9UBW8 275 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 FBXL4Q9UKA2 621 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 PCDHGB6Q9Y5F9 930 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 IER3IP1Q9Y5U9 82 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 V9GYH0 126 aa8.96□□□□□ -0.98
USP39-214ENST00000474572 ARID1BQ8NFD5 2236 aaPredicted RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 COL27A1Q8IZC6 1860 aaPredicted RBP8.96□□□□□ -0.98
USP39-214ENST00000474572 IGHV5-10-1A0A0J9YXX1 117 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 DAPL1A0PJW8 107 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ELOA3DA6NLF2 546 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 VSTM2BA6NLU5 285 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 GTPBP1O00178 669 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 TBX1O43435 398 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SIGLEC6O43699 453 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 PRKNO60260 465 aaPredicted RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 FADS1O60427 444 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CDC40O60508 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP39-214ENST00000474572 REM1O75628 298 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 PTTG1O95997 202 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 TFP02787 698 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 MT-ND5P03915 603 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CD1AP06126 327 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CLEC2LP0C7M8 214 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 OR2T7P0C7T2 308 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 HPGDP15428 266 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CELP19835 753 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CFL1P23528 166 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 IL12BP29460 328 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SDC2P34741 201 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ATP6V1E1P36543 226 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 PSMD7P51665 324 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 NR0B1P51843 470 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 SLC25A1P53007 311 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 DLX5P56178 289 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CCL7P80098 99 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 ZXDAP98168 799 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 CSTF1Q05048 431 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 RUNX1T1Q06455 604 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 LTBQ06643 244 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 PLCXD2Q0VAA5 305 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 HNRNPA0Q13151 305 aaKnown RBP8.95□□□□□ -0.98
USP39-214ENST00000474572 ELOA3BQ3SY89 546 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 KLHL12Q53G59 568 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 SPANXN2Q5MJ10 180 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 LCN1P1Q5VSP4 162 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 AGAP7PQ5VUJ5 663 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 HLA-DQA1Q5Y7H0 255 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 STEAP3Q658P3 488 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 FAAH2Q6GMR7 532 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 B3GLCTQ6Y288 498 aa8.95□□□□□ -0.98
USP39-214ENST00000474572 LANCL3Q6ZV70 420 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms