RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 DIRAS1O95057 198 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MFN2O95140 757 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 AK1P00568 194 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MT-ND5P03915 603 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SERPINA7P05543 415 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DBIP07108 87 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FESP07332 822 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CYC1P08574 325 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 IFI6P09912 130 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PABPC4LP0CB38 370 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 GKN3PP0CG01 181 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 UMPSP11172 480 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CYP4B1P13584 511 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 TCEA1P23193 301 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PSMA4P25789 261 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ABCD3P28288 659 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 RYKP34925 604 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PIGAP37287 484 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DCTP40126 519 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SOX3P41225 446 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MAP3K8P41279 467 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MAGEA8P43361 318 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CLK3P49761 638 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SSR4P51571 173 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ATP12AP54707 1039 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PSMD4P55036 377 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FBXW4P57775 412 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MLF1P58340 268 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ACTR3P61158 418 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 AP2B1P63010 937 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SELENOWP63302 87 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 TXNL4AP83876 142 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 HOXC5Q00444 222 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PPP1R8Q12972 351 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 LARS2Q15031 903 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 RCN1Q15293 331 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MAPK14Q16539 360 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MEP1AQ16819 746 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DUSP7Q16829 419 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 GRAMD1BQ3KR37 738 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM98BQ52LJ0 330 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 IFI44LQ53G44 452 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DCAF10Q5QP82 559 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PDZK1Q5T2W1 519 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PLAG1Q6DJT9 500 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 OR5M10Q6IEU7 315 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 LCN8Q6JVE9 175 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 HEPHL1Q6MZM0 1159 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 RGS7BPQ6MZT1 257 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DEF8Q6ZN54 512 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF836Q6ZNA1 936 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FRRS1Q6ZNA5 592 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 Q6ZNX1 250 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 Q6ZPA2 131 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CCDC80Q76M96 950 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 EIF3MQ7L2H7 374 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF627Q7L945 461 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 AMIGO2Q86SJ2 522 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 MARCH3Q86UD3 253 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CARM1Q86X55 608 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 RBM45Q8IUH3 476 aaKnown RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 AQP12AQ8IXF9 295 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC34A3Q8N130 599 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 EID3Q8N140 333 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CLIP4Q8N3C7 705 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC5A8Q8N695 610 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 METTL25Q8N6Q8 603 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FAM86B1Q8N7N1 296 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CLEC1AQ8NC01 280 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ICA1LQ8NDH6 482 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 BEND2Q8NDZ0 799 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CHDHQ8NE62 594 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 OR4C3Q8NH37 302 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 NUBPLQ8TB37 319 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC22A8Q8TCC7 542 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 LZICQ8WZA0 190 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 PROX1Q92786 737 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ARSGQ96EG1 525 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SH3YL1Q96HL8 342 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SNX22Q96L94 193 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF354BQ96LW1 612 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 FER1L6-AS2Q96M78 137 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 JSRP1Q96MG2 331 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 IP6K3Q96PC2 410 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 BTBD9Q96Q07 612 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 NODALQ96S42 347 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 RASL10BQ96S79 203 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CCNL2Q96S94 520 aaPredicted RBP3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 DOHHQ9BU89 302 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CHID1Q9BWS9 393 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SEMA4CQ9C0C4 833 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 AMBRA1Q9C0C7 1298 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 ZNF350Q9GZX5 532 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 LHPPQ9H008 270 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SEMA6AQ9H2E6 1030 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 SLC38A1Q9H2H9 487 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 BCL2L10Q9HD36 194 aa3.72□□□□□ -1.81
TMEM39A-204ENST00000468545 CTPS2Q9NRF8 586 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms