RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ACKR1Q16570 336 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF239Q16600 458 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 PRAMEF8Q5VWM4 474 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 PRAMEF7Q5VXH5 474 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 FCRLAQ7L513 359 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 P3H2Q8IVL5 708 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 CADM2Q8N3J6 435 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ZNF317Q96PQ6 595 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 CPPED1Q9BRF8 314 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 SAR1AQ9NR31 198 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 KLHL14Q9P2G3 628 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 TMED7Q9Y3B3 224 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 ARID1AO14497 2285 aa12.53□□□□□ -0.4
CCHCR1-211ENST00000467553 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SULT2B1O00204 365 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 FBP2O00757 339 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SS18L1O75177 396 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 PRG2P13727 222 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ETS2P15036 469 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 CXCR1P25024 350 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC1A3P43003 542 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 HTR3AP46098 478 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 DIO1P49895 249 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 POLR2HP52434 150 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 MTPNP58546 118 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 COPZ1P61923 177 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SELPLGQ14242 412 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ZSWIM7Q19AV6 140 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 TMEM201Q5SNT2 666 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 TMPPEQ6ZT21 453 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ZNF550Q7Z398 422 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 KRT73Q86Y46 540 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ABHD3Q8WU67 409 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 BDH2Q9BUT1 245 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 OR11A1Q9GZK7 315 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 GSX1Q9H4S2 264 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 C12orf49Q9H741 205 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 KLHL28Q9NXS3 571 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 OSGIN1Q9UJX0 560 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
CCHCR1-211ENST00000467553 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 FAAHO00519 579 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 FRS3O43559 492 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 AQP1P29972 269 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 NR1H2P55055 460 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 OR2B6P58173 313 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 CSNK2A1P68400 391 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 HOXC5Q00444 222 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 RASGEF1BQ0VAM2 473 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 CYLC2Q14093 348 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 RNPS1Q15287 305 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 ADRM1Q16186 407 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 CYP51A1Q16850 503 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 BEX5Q5H9J7 111 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 RNF220Q5VTB9 566 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 SERPINA11Q86U17 422 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 C10orf82Q8WW14 230 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 DDIT4LQ96D03 193 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 PIK3IP1Q96FE7 263 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 CCL19Q99731 98 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 SPATA5L1Q9BVQ7 753 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 PIF1Q9H611 641 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 TMEM38AQ9H6F2 299 aa12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 C6orf203Q9P0P8 240 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-211ENST00000467553 DSCAMO60469 2012 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 HEXAP06865 529 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 YES1P07947 543 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 PAX1P15863 534 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 AGTR1P30556 359 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 SEC24CP53992 1094 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 LTBQ06643 244 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 NANOGP8Q6NSW7 305 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 CLEC9AQ6UXN8 241 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 NUFIP2Q7Z417 695 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 SNX32Q86XE0 403 aa12.5□□□□□ -0.41
CCHCR1-211ENST00000467553 C11orf65Q8NCR3 313 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms