RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 TRAM2Q15035 370 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 CEBPEQ15744 281 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZFP69Q49AA0 526 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 EIPR1Q53HC9 387 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF311Q5JNZ3 666 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 ACER2Q5QJU3 275 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 RSBN1Q5VWQ0 802 aaPredicted RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 C1orf94Q6P1W5 598 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF551Q7Z340 670 aaPredicted RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 GID4Q8IVV7 300 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 CDK20Q8IZL9 346 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 RNF113BQ8IZP6 322 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 TMEM156Q8N614 296 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 APCDD1LQ8NCL9 501 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 OR9A2Q8NGT5 310 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 NUBPLQ8TB37 319 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF721Q8TF20 911 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 SLC39A7Q92504 469 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 RPL3LQ92901 407 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 CNRIP1Q96F85 164 aaPredicted RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF681Q96N22 645 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 GAL3ST4Q96RP7 486 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 UTP23Q9BRU9 249 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 GON7Q9BXV9 100 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 RNF32Q9H0A6 362 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.19□□□□□ -0.94
PMF1-204ENST00000466489 SLA2Q9H6Q3 261 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 FOLH1BQ9HBA9 442 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 RPRD1BQ9NQG5 326 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF71Q9NQZ8 489 aaPredicted RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 ZNF275Q9NSD4 429 aaPredicted RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 ING3Q9NXR8 418 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 YARS2Q9Y2Z4 477 aaKnown RBP9.19□□□□□ -0.94
PMF1-204ENST00000466489 SNX8Q9Y5X2 465 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 PMF1-BGLAPU3KQ54 211 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 COL6A6A6NMZ7 2263 aa9.19□□□□□ -0.94
PMF1-204ENST00000466489 A0A087WV62 115 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 C2orf92A0A1B0GVN3 265 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 WASHC1A8K0Z3 465 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 MASP2O00187 686 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 SLC28A2O43868 658 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ORC5O43913 435 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TMCC2O75069 709 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 STX11O75558 287 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 AK1P00568 194 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 GASTP01350 101 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 IGKV3-11P04433 115 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 AQP1P29972 269 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TNFSF8P32971 234 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 CYB561P49447 251 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 SSR4P51571 173 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 GPR143P51810 404 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TPTEP56180 551 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 WNT4P56705 351 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TAS2R43P59537 309 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 DCAF7P61962 342 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 OC90Q02509 493 aaPredicted RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 FUT7Q11130 342 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 KLRB1Q12918 225 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 HSPB3Q12988 150 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 GAB1Q13480 694 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 RIN1Q13671 783 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ZNHIT3Q15649 155 aaPredicted RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 KCNJ8Q15842 424 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TSTQ16762 297 aaKnown RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 PRICKLE4Q2TBC4 344 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 LCN1P1Q5VSP4 162 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 H3F3CQ6NXT2 135 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ZCCHC12Q6PEW1 402 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 KLHL17Q6TDP4 642 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 OPN5Q6U736 354 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 BAIAP2L2Q6UXY1 529 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 RASSF6Q6ZTQ3 369 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 SZRD1Q7Z422 152 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TPRA1Q86W33 373 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ATCAYQ86WG3 371 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 CCDC71Q8IV32 467 aaPredicted RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 LIX1LQ8IVB5 337 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 GPALPP1Q8IXQ4 340 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 UBQLNLQ8IYU4 475 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 DND1Q8IYX4 353 aaKnown RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 OR52N1Q8NH53 320 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 OR52J3Q8NH60 311 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 THAP3Q8WTV1 239 aaPredicted RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 C15orf40Q8WUR7 153 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ASB15Q8WXK1 588 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 UCN3Q969E3 161 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 MAL2Q969L2 176 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 ZC3HAV1LQ96H79 300 aaKnown RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 PRRC1Q96M27 445 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 C5orf34Q96MH7 638 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 AMDHD1Q96NU7 426 aa9.18□□□□□ -0.94
PMF1-204ENST00000466489 TREX2Q9BQ50 279 aaPredicted RBP9.18□□□□□ -0.94
PMF1-204ENST00000466489 MRI1Q9BV20 369 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms