RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CCNA2P20248 432 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 USF1P22415 310 aaPredicted RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 FKBP2P26885 142 aaKnown RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 CLK1P49759 484 aaKnown RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 OR2B6P58173 313 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 MAD2L1Q13257 205 aaPredicted RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 AP1ARQ63HQ0 302 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 TNFAIP8L2Q6P589 184 aaPredicted RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 FRRS1Q6ZNA5 592 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 C17orf78Q8N4C9 275 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 TCP10LQ8TDR4 215 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 PROX1Q92786 737 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 ROPN1LQ96C74 230 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 SAP130Q9H0E3 1048 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 FKRPQ9H9S5 495 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 EXOSC3Q9NQT5 275 aaKnown RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 SLC17A5Q9NRA2 495 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 POLE3Q9NRF9 147 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 SLC7A10Q9NS82 523 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 NOP53Q9NZM5 478 aaKnown RBP16.49■□□□□ 0.23
SRSF4-202ENST00000466448 TMEM181Q9P2C4 612 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 DCTN4Q9UJW0 460 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 TRAPPC4Q9Y296 219 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 FLVCR1Q9Y5Y0 555 aa16.49■□□□□ 0.23
SRSF4-202ENST00000466448 SCN2BO60939 215 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 AGR2O95994 175 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 CSF3P09919 207 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 BMP4P12644 408 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 IDH2P48735 452 aaKnown RBP16.48■□□□□ 0.23
SRSF4-202ENST00000466448 KCNJ10P78508 379 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 CHRNB3Q05901 458 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 ATAD3BQ5T9A4 648 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 TSPO2Q5TGU0 170 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 ANKRD46Q86W74 232 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 C1orf162Q8NEQ5 155 aaPredicted RBP16.48■□□□□ 0.23
SRSF4-202ENST00000466448 OR8J2Q8NGG1 315 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 PCDHGB4Q9UN71 923 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 SLC9A8Q9Y2E8 581 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 AMDHD2Q9Y303 409 aa16.48■□□□□ 0.23
SRSF4-202ENST00000466448 PRAMEF27A3QJZ7 478 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 ATP6V1G2-DDX39BF2Z307 99 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 AP3D1O14617 1153 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 IMPDH2P12268 514 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 APOBEC3AP31941 199 aaPredicted RBP16.47■□□□□ 0.23
SRSF4-202ENST00000466448 PHC1P78364 1004 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 LSM11P83369 360 aaKnown RBP eCLIP16.47■□□□□ 0.23
SRSF4-202ENST00000466448 ARFGAP2Q8N6H7 521 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 CNOT9Q92600 299 aaKnown RBP16.47■□□□□ 0.23
SRSF4-202ENST00000466448 PARPBPQ9NWS1 579 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 UPB1Q9UBR1 384 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 PMF1-BGLAPU3KQ54 211 aa16.47■□□□□ 0.23
SRSF4-202ENST00000466448 TMED7-TICAM2A0A0A6YYA0 188 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 VWC2LB2RUY7 222 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 LMX1BO60663 402 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 EIF1BO60739 113 aaKnown RBP16.46■□□□□ 0.23
SRSF4-202ENST00000466448 C1QCP02747 245 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 UQCRC2P22695 453 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 IGFBP5P24593 272 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 THBS2P35442 1172 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 HTR3AP46098 478 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 SLC35A1P78382 337 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 TGFBR3Q03167 851 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 SLC17A1Q14916 467 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 SWI5Q1ZZU3 235 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 SMU1Q2TAY7 513 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 MST1LQ2TV78 715 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 SAXO2Q658L1 398 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 PPP1R36Q96LQ0 422 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.46■□□□□ 0.23
SRSF4-202ENST00000466448 OSGIN1Q9UJX0 560 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 MOKQ9UQ07 419 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 TMED7Q9Y3B3 224 aa16.46■□□□□ 0.23
SRSF4-202ENST00000466448 PLCE1Q9P212 2302 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 PRSS51A0A1B0GVH4 220 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 TMEM72A0PK05 275 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 SLC35F4A4IF30 521 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 ZNF208O43345 1280 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 CPSF4O95639 269 aaKnown RBP16.45■□□□□ 0.22
SRSF4-202ENST00000466448 BPGMP07738 259 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 KHKP50053 298 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 SRSF2Q01130 221 aaKnown RBP16.45■□□□□ 0.22
SRSF4-202ENST00000466448 GGTLC2Q14390 218 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 PDCD2Q16342 344 aaPredicted RBP16.45■□□□□ 0.22
SRSF4-202ENST00000466448 GPAT3Q53EU6 434 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 IL17RELQ6ZVW7 336 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 RIBC1Q8N443 379 aaPredicted RBP16.45■□□□□ 0.22
SRSF4-202ENST00000466448 DDIT4LQ96D03 193 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 FBXO17Q96EF6 278 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 NEURL3Q96EH8 262 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 C19orf24Q9BVV8 132 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 AKTIPQ9H8T0 292 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 CHODLQ9H9P2 273 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 LGALS13Q9UHV8 139 aa16.45■□□□□ 0.22
SRSF4-202ENST00000466448 ZC3H12DA2A288 527 aaKnown RBP16.44■□□□□ 0.22
SRSF4-202ENST00000466448 HMGN4O00479 90 aa16.44■□□□□ 0.22
SRSF4-202ENST00000466448 NUDT17P0C025 328 aa16.44■□□□□ 0.22
SRSF4-202ENST00000466448 SRD5A1P18405 259 aa16.44■□□□□ 0.22
SRSF4-202ENST00000466448 TACR3P29371 465 aa16.44■□□□□ 0.22
SRSF4-202ENST00000466448 MPGP29372 298 aa16.44■□□□□ 0.22
SRSF4-202ENST00000466448 GZMKP49863 264 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms