RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RAB34Q9BZG1 259 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SELENOIQ9C0D9 397 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 NXF5Q9H1B4 397 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SUDS3Q9H7L9 328 aaPredicted RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 PTGES2Q9H7Z7 377 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 PDFQ9HBH1 243 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 POPDC2Q9HBU9 364 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 NANSQ9NR45 359 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 DAZ3Q9NR90 486 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ABCB10Q9NRK6 738 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 AATFQ9NY61 560 aaKnown RBP eCLIP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 CD274Q9NZQ7 290 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 ADAM22Q9P0K1 906 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 NYAP2Q9P242 653 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 NAP1L2Q9ULW6 460 aaPredicted RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 PRPF19Q9UMS4 504 aaKnown RBP1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 SNX6Q9UNH7 406 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 CELA1Q9UNI1 258 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 MEMO1Q9Y316 297 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 TIMM10BQ9Y5J6 103 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 MAD1L1Q9Y6D9 718 aa1.28□□□□□ -2.2
NUCKS1-202ENST00000464938 RAI1Q7Z5J4 1906 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 LTBP1Q14766 1721 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RPAP1Q9BWH6 1393 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PLEKHG1Q9ULL1 1385 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 C15orf38-AP3S2A0A0A6YYH1 394 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A0J9YXY3 114 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 A0A1B0GUS0 222 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CLRN2A0PK11 232 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 USP27XA6NNY8 438 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 TMEM110-MUSTN1A8MSY1 372 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 GPR89AB7ZAQ6 455 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 GFYI3L273 518 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 KIF2AO00139 706 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CXCL11O14625 94 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 NBR2O15453 112 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PFKFB2O60825 505 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RAMP3O60896 148 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 N4BP1O75113 896 aaKnown RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 SURF6O75683 361 aaKnown RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 LRATO95237 230 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 STAMBPO95630 424 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 HPNP05981 417 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 GPR89BP0CG08 455 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 POU2F1P14859 743 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CD1EP15812 388 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 FUT3P21217 361 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PCMT1P22061 227 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CCNE1P24864 410 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CD1BP29016 333 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RFC4P35249 363 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CTRLP40313 264 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 QARSP47897 775 aaKnown RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CCT3P49368 545 aaKnown RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 HLCSP50747 726 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 DUSP3P51452 185 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 GBX2P52951 348 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 APOC4P55056 127 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 BIDP55957 195 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 WNT4P56705 351 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RIPK4P57078 832 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 NUP107P57740 925 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ACTR1AP61163 376 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 TNFRSF17Q02223 184 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CKAP4Q07065 602 aaKnown RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 IL24Q13007 206 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PSG7Q13046 419 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ORC2Q13416 577 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 HERPUD1Q15011 391 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PDK3Q15120 406 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 TRIM16LQ309B1 348 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 C1orf146Q5VVC0 180 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RFLNAQ6ZTI6 216 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 CCDC80Q76M96 950 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ARCQ7LC44 396 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 KRTAP11-1Q8IUC1 163 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 NRMQ8IXM6 262 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF679Q8IYX0 411 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 RDH10Q8IZV5 341 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ALLCQ8N6M5 410 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 Q8N7P7 452 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 MFSD9Q8NBP5 474 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 OR2L5Q8NG80 312 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 OR10G3Q8NGC4 313 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 OR51S1Q8NGJ8 323 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 OR5D13Q8NGL4 314 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 NEIL3Q8TAT5 605 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 FBXO30Q8TB52 745 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 DNAJA4Q8WW22 397 aaPredicted RBP1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ZNF606Q8WXB4 792 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 ST8SIA1Q92185 356 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 MYDGFQ969H8 173 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 TM4SF19Q96DZ7 209 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 PAGE5Q96GU1 130 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 TMEM101Q96IK0 257 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 HIST1H4GQ99525 98 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 GAL3ST1Q99999 423 aa1.27□□□□□ -2.21
NUCKS1-202ENST00000464938 EBF4Q9BQW3 602 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms