RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 KCNK9Q9NPC2 374 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 EXOSC3Q9NQT5 275 aaKnown RBP12.77□□□□□ -0.37
ALMS1-202ENST00000464408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
ALMS1-202ENST00000464408 AIG1Q9NVV5 245 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 EMC3Q9P0I2 261 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 BTNL2Q9UIR0 455 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 OSGIN1Q9UJX0 560 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 SLC25A15Q9Y619 301 aa12.77□□□□□ -0.37
ALMS1-202ENST00000464408 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.37
ALMS1-202ENST00000464408 TMED7-TICAM2A0A0A6YYA0 188 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 E7EQL1 145 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 ITGA5P08648 1049 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 TACR3P29371 465 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 IDUAP35475 653 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 SLC16A1P53985 500 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 HPCAP84074 193 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 H3F3AP84243 136 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 SLC25A3Q00325 362 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 CEP85LQ5SZL2 805 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 OGFOD2Q6N063 350 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 ANKRD42Q8N9B4 389 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 PIGXQ8TBF5 258 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 TRNT1Q96Q11 434 aaKnown RBP12.76□□□□□ -0.37
ALMS1-202ENST00000464408 USB1Q9BQ65 265 aaKnown RBP12.76□□□□□ -0.37
ALMS1-202ENST00000464408 C1QTNF6Q9BXI9 259 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 B3GALT5Q9Y2C3 310 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 TMED7Q9Y3B3 224 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 HDGFL3Q9Y3E1 203 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
ALMS1-202ENST00000464408 SPIN1Q9Y657 262 aaPredicted RBP12.76□□□□□ -0.37
ALMS1-202ENST00000464408 CIB4A0PJX0 185 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 CCT8L1PA6NM43 557 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 CRLF1O75462 422 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 RPS4Y1P22090 263 aaKnown RBP12.75□□□□□ -0.37
ALMS1-202ENST00000464408 EPHA3P29320 983 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 WDR4P57081 412 aaKnown RBP12.75□□□□□ -0.37
ALMS1-202ENST00000464408 IRX1P78414 480 aaPredicted RBP12.75□□□□□ -0.37
ALMS1-202ENST00000464408 DMTNQ08495 405 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 GABRA6Q16445 453 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 MRPL2Q5T653 305 aaKnown RBP12.75□□□□□ -0.37
ALMS1-202ENST00000464408 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 ZNF621Q6ZSS3 439 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 P2RY8Q86VZ1 359 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 WDR60Q8WVS4 1066 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 OIT3Q8WWZ8 545 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 ZHX1-C8orf76Q96EF9 292 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 OR52E6Q96RD3 313 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 ALG2Q9H553 416 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 RLIMQ9NVW2 624 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 ASB6Q9NWX5 421 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 TMEM181Q9P2C4 612 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 MALT1Q9UDY8 824 aa12.75□□□□□ -0.37
ALMS1-202ENST00000464408 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 M0R1B8 84 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 PDLIM1O00151 329 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 MRPL33O75394 65 aaKnown RBP12.74□□□□□ -0.37
ALMS1-202ENST00000464408 PGRP06401 933 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 GKN3PP0CG01 181 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 KITP10721 976 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 POLR2HP52434 150 aaKnown RBP12.74□□□□□ -0.37
ALMS1-202ENST00000464408 MVDP53602 400 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 EPS8Q12929 822 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 ETFDHQ16134 617 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 WDR31Q8NA23 367 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 MGARPQ8TDB4 240 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 HS6ST2Q96MM7 605 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 CACNG6Q9BXT2 260 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 SLC7A10Q9NS82 523 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
ALMS1-202ENST00000464408 STAB1Q9NY15 2570 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 IGHV4-30-2A0A087WSY4 118 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 GPR171O14626 319 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 ZNF208O43345 1280 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 DNPH1O43598 174 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 SSX4O60224 188 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 GPRIN2O60269 458 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 SNUPNO95149 360 aaKnown RBP12.73□□□□□ -0.37
ALMS1-202ENST00000464408 NR2F1P10589 423 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 CD40P25942 277 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 TTKP33981 857 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 SLC1A3P43003 542 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 MAGEA8P43361 318 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
ALMS1-202ENST00000464408 BNIP2Q12982 314 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 GTDC1Q4AE62 458 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 RPS26P11Q5JNZ5 115 aaPredicted RBP12.73□□□□□ -0.37
ALMS1-202ENST00000464408 TSPO2Q5TGU0 170 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 TMEM108Q6UXF1 575 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 ZNF836Q6ZNA1 936 aa12.73□□□□□ -0.37
ALMS1-202ENST00000464408 MAVSQ7Z434 540 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms