RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 UQCRBP14927 111 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 IDUAP35475 653 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 CDKN2CP42773 168 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC35A1P78382 337 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 TNK1Q13470 666 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 GSTA3Q16772 222 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 C1QTNF12Q5T7M4 302 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ATG16L1Q676U5 607 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 HMGN2P46Q86SG4 172 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ATG4DQ86TL0 474 aaPredicted RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 DTX2Q86UW9 622 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 NEUROG1Q92886 237 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 DDIT4LQ96D03 193 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 MAELQ96JY0 434 aaKnown RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 WDR55Q9H6Y2 383 aaPredicted RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 OSGIN1Q9UJX0 560 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 MGAT4BQ9UQ53 548 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 TMED7Q9Y3B3 224 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 ATRQ13535 2644 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 CFAP73A6NFT4 308 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 RFXANKO14593 260 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 AP3D1O14617 1153 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC22A3O75751 556 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 GSNP06396 782 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 NR2F1P10589 423 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 IL7RP16871 459 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 NTF4P34130 210 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 OR2B6P58173 313 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 EPS8Q12929 822 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 ZSWIM7Q19AV6 140 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 PDCD4Q53EL6 469 aaKnown RBP12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 COX20Q5RI15 118 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 OR7E24Q6IFN5 339 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 TMEM108Q6UXF1 575 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 MSANTD1Q6ZTZ1 278 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 CCDC103Q8IW40 242 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 PEX5LQ8IYB4 626 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 UBE2J2Q8N2K1 259 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 MUS81Q96NY9 551 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 TRAF4Q9BUZ4 470 aaPredicted RBP12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 ADAM19Q9H013 955 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 TAS2R16Q9NYV7 291 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 CALML5Q9NZT1 146 aa12.66□□□□□ -0.38
SNRNP40-203ENST00000463988 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 CDHR4A6H8M9 788 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 CCT8L1PA6NM43 557 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 PDLIM1O00151 329 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 ABCD4O14678 606 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 RAMP1O60894 148 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 CD8AP01732 235 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 IMPDH2P12268 514 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 CCNA2P20248 432 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 PTAFRP25105 342 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 TACR3P29371 465 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 MVDP53602 400 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 PPP2R2BQ00005 443 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC17A1Q14916 467 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 MAPK11Q15759 364 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 KLHL17Q6TDP4 642 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 AMBRA1Q9C0C7 1298 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 ALG2Q9H553 416 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 PIF1Q9H611 641 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 BARX1Q9HBU1 254 aaPredicted RBP12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 SDR39U1Q9NRG7 319 aaPredicted RBP12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 THUMPD1Q9NXG2 353 aaKnown RBP12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 ZIM2Q9NZV7 527 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 P2RX2Q9UBL9 471 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC9A8Q9Y2E8 581 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 FLVCR1Q9Y5Y0 555 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC25A15Q9Y619 301 aa12.65□□□□□ -0.38
SNRNP40-203ENST00000463988 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 COL6A5A8TX70 2615 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 RAD51DO75771 328 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 PCSK6P29122 969 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 CDH11P55287 796 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 VEZF1Q14119 521 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 GABRA6Q16445 453 aa12.64□□□□□ -0.39
SNRNP40-203ENST00000463988 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms