RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 PNMTP11086 282 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 PRPS1P60891 318 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 ACTA2P62736 377 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 ACTG2P63267 376 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 E2F1Q01094 437 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 C14orf28Q4W4Y0 310 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 WBP2NLQ6ICG8 309 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 CARFQ8N187 725 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 LRRC17Q8N6Y2 441 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 C7orf57Q8NEG2 295 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 OR6F1Q8NGZ6 308 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 OR4K13Q8NH42 304 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 PTPMT1Q8WUK0 201 aaPredicted RBP13.81□□□□□ -0.2
LDLR-202ENST00000455727 LIPHQ8WWY8 451 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 SLC46A1Q96NT5 459 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
LDLR-202ENST00000455727 DDOQ99489 341 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 GMEB2Q9UKD1 530 aa13.81□□□□□ -0.2
LDLR-202ENST00000455727 MEIOCA2RUB1 952 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 H3BMH7 237 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 OGG1O15527 345 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 IL33O95760 270 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 IGFBP4P22692 258 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SHC1P29353 583 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SLC37A1P57057 533 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 DAB2P98082 770 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 DBPQ10586 325 aaPredicted RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 IL18Q14116 193 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 P2RY14Q15391 338 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SLC35D3Q5M8T2 416 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 TRIQKQ629K1 86 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 METTL27Q8N6F8 245 aaPredicted RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 C19orf18Q8NEA5 215 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SDR9C7Q8NEX9 313 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 NLGN4YQ8NFZ3 816 aaPredicted RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 ZC3HAV1LQ96H79 300 aaKnown RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 OR1F2PQ96R84 312 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 CNN2Q99439 309 aaKnown RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 TTYH2Q9BSA4 534 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 TMEM43Q9BTV4 400 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 PPIL3Q9H2H8 161 aaKnown RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 ST6GALNAC2Q9UJ37 374 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 LINC00854A0A1B0GVQ3 168 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SERPINA3P01011 423 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 CD1AP06126 327 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 MYL9P24844 172 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 MAOBP27338 520 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 DIO1P49895 249 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 SLC3A1Q07837 685 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 IL10RAQ13651 578 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 PON3Q15166 354 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 PAMR1Q6UXH9 720 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 CEACAM19Q7Z692 300 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 LRRC28Q86X40 367 aaPredicted RBP13.8□□□□□ -0.2
LDLR-202ENST00000455727 NPEPL1Q8NDH3 523 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 C17orf47Q8NEP4 570 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 OR14A16Q8NHC5 309 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 KCNJ15Q99712 375 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 NMNAT2Q9BZQ4 307 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 CEP192Q8TEP8 1941 aa13.8□□□□□ -0.2
LDLR-202ENST00000455727 B4DXG7 233 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 GNB5O14775 395 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 TFP02787 698 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 PYCR1P32322 319 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 RPL4P36578 427 aaKnown RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 PPM1FP49593 454 aaPredicted RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 NXPH1P58417 271 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 DEFB133Q30KQ1 61 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 IDNKQ5T6J7 187 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 SSX6Q7RTT6 188 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 ZMYND19Q96E35 227 aaPredicted RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 CYSLTR2Q9NS75 346 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 CA14Q9ULX7 337 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 MRPS17Q9Y2R5 130 aaKnown RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 IGKV1D-42A0A075B6H8 117 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 TRAV1-2A0A0B4J238 106 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 HMX3A6NHT5 357 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 RHPN2P1A8MT19 583 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 KRT8P05787 483 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 UBL4AP11441 157 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 HPGDP15428 266 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 ELK1P19419 428 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 LCN1P31025 176 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 RORAP35398 523 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 THBS2P35442 1172 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 KIR2DL3P43628 341 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 SKP2Q13309 424 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 ACSM3Q53FZ2 586 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 RSBN1Q5VWQ0 802 aaPredicted RBP13.79□□□□□ -0.2
LDLR-202ENST00000455727 MZT2BQ6NZ67 158 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 TRILQ7L0X0 811 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 NUP54Q7Z3B4 507 aa13.79□□□□□ -0.2
LDLR-202ENST00000455727 ATG4DQ86TL0 474 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms