RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 PON3Q15166 354 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 CCNJQ5T5M9 372 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 AP1ARQ63HQ0 302 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 TYW3Q6IPR3 259 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 VWA1Q6PCB0 445 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 ARMC8Q8IUR7 673 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 FNDC9Q8TBE3 224 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 FAM110BQ8TC76 370 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 OIT3Q8WWZ8 545 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 SLCO4A1Q96BD0 722 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 STARD4Q96DR4 205 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 SLC47A1Q96FL8 570 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 SH3YL1Q96HL8 342 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 PYURFQ96I23 114 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 HSH2DQ96JZ2 352 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 FOXC2Q99958 501 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 PRRG4Q9BZD6 226 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 SAP130Q9H0E3 1048 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 YY1AP1Q9H869 796 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 UBQLN4Q9NRR5 601 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 ZNF175Q9Y473 711 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 AP4S1Q9Y587 144 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 V9GYQ6 96 aa16.17■□□□□ 0.18
SQSTM1-204ENST00000453046 A0A087WZY1 265 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 EIF1AYO14602 144 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 GOSR1O95249 250 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 OPN1SWP03999 348 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 ATP6V1C1P21283 382 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 RPS4Y1P22090 263 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 EIF1AXP47813 144 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 KCNJ5P48544 419 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 SELENOWP63302 87 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 CHRNEQ04844 493 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 ZAR1Q86SH2 424 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 MISPQ8IVT2 679 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 FAM86B1Q8N7N1 296 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 GEMIN6Q8WXD5 167 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 ZNF845Q96IR2 970 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 FBXO34Q9NWN3 711 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 BAG5Q9UL15 447 aa16.16■□□□□ 0.18
SQSTM1-204ENST00000453046 MED13LQ71F56 2210 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 SEMG1P04279 462 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 THBS1P07996 1170 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 FCGR2AP12318 317 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 ZNF17P17021 662 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 CD247P20963 164 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 PRKAR1BP31321 381 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 MAGEA2P43356 314 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 KEAP1Q14145 624 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 FGFBP1Q14512 234 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 POU4F3Q15319 338 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 IFI44LQ53G44 452 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 BTLAQ7Z6A9 289 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 PEX5LQ8IYB4 626 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 PQLC1Q8N2U9 271 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 ZBTB8AQ96BR9 441 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 SEPHS2Q99611 448 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 OPN3Q9H1Y3 402 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 MTHFD2LQ9H903 347 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 RNF122Q9H9V4 155 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 C6orf203Q9P0P8 240 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 IFT52Q9Y366 437 aa16.15■□□□□ 0.18
SQSTM1-204ENST00000453046 PCNX3Q9H6A9 2034 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 A0A1W2PQD3 144 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 AGAP5A6NIR3 686 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 TMEM229AB2RXF0 380 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 PLGP00747 810 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 PABPC4LP0CB38 370 aaKnown RBP16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 ANPEPP15144 967 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 CD79BP40259 229 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 KIR2DL2P43627 348 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 FAM27E3Q08E93 113 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 DHRS4L2Q6PKH6 230 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 VTCN1Q7Z7D3 282 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 GTPBP8Q8N3Z3 284 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 ZNF527Q8NB42 609 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 B4GALNT2Q8NHY0 566 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 TPD52L3Q96J77 140 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 MED17Q9NVC6 651 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 PROCRQ9UNN8 238 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 ABCA4P78363 2273 aa16.14■□□□□ 0.17
SQSTM1-204ENST00000453046 H3BNH8 94 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 FCMRO60667 390 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 NUDT14O95848 222 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 OPN1LWP04000 364 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 RAF1P04049 648 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 DBIP07108 87 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 POU2F1P14859 743 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 RIPPLY3P57055 190 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 RAC1P63000 192 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 KCNJ10P78508 379 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 SNCBQ16143 134 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 TMEM44Q2T9K0 475 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 LIN52Q52LA3 116 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 PDSS1Q5T2R2 415 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 PAMR1Q6UXH9 720 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 FKBP9P1Q75LS8 142 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 OLIG3Q7RTU3 272 aa16.13■□□□□ 0.17
SQSTM1-204ENST00000453046 GGNQ86UU5 652 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms