RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CUTCQ9NTM9 273 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SERTAD3Q9UJW9 196 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SF3B6Q9Y3B4 125 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 SPIN1Q9Y657 262 aaPredicted RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 MAU2Q9Y6X3 613 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 A0A075B6Q4 140 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 J3QRE1 110 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 PTP4A3O75365 173 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 OR2B3O76000 313 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 IFNA16P05015 189 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 NGFRP08138 427 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 CD82P27701 267 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 RPS19P39019 145 aaKnown RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 CLN3Q13286 438 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 BIKQ13323 160 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 SMARCD3Q6STE5 483 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 ZNF550Q7Z398 422 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 GID4Q8IVV7 300 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 CDK20Q8IZL9 346 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 OR7G1Q8NGA0 311 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 KCNE4Q8WWG9 221 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 GATAD2BQ8WXI9 593 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 BARHL1Q9BZE3 327 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 AKIRIN1Q9H9L7 192 aaPredicted RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 QPCTLQ9NXS2 382 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 DAPK2Q9UIK4 370 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 SSR3Q9UNL2 185 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 MMACHCQ9Y4U1 282 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 PEX16Q9Y5Y5 336 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 CACNA1BQ00975 2339 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 FAM183AA6NL82 134 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 LIPCP11150 499 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 BMP7P18075 431 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 ETV6P41212 452 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 PSMD7P51665 324 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 SRSF6Q13247 344 aaKnown RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 FHL1Q13642 323 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 DSG2Q14126 1118 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 PLBD1Q6P4A8 553 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 KIRREL2Q6UWL6 708 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 LAPTM4BQ86VI4 370 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 GPR135Q8IZ08 494 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 PTPMT1Q8WUK0 201 aaPredicted RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 NKD1Q969G9 470 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 CMC2Q9NRP2 79 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 TXNL4BQ9NX01 149 aaKnown RBP9.81□□□□□ -0.84
PKP4-206ENST00000452162 PRODH2Q9UF12 536 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 OR10H1Q9Y4A9 318 aa9.81□□□□□ -0.84
PKP4-206ENST00000452162 TRAV27A0A087WT01 109 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 IGKV3D-11A0A0A0MRZ8 115 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SERINC4A6NH21 518 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 C17orf105B2RV13 164 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 KLK10O43240 276 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 RAD1O60671 282 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 HCN1O60741 890 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 TSPAN19P0C672 248 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SAGP10523 405 aaPredicted RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 ITPKBP27987 946 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 S100A5P33763 92 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 RPS25P62851 125 aaKnown RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 ST3GAL2Q16842 350 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 TRIM16LQ309B1 348 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 NDUFAF6Q330K2 333 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ALG10BQ5I7T1 473 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 LHFPL3Q86UP9 236 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SIRT6Q8N6T7 355 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 PSD4Q8NDX1 1056 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 OR4C3Q8NH37 302 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 OR52N1Q8NH53 320 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 KISS1RQ969F8 398 aaPredicted RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 PPP1R14BQ96C90 147 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 MVB12AQ96EY5 273 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 OR1F2PQ96R84 312 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 RHBDL2Q9NX52 303 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ERVK13-1Q9NX77 482 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 YARS2Q9Y2Z4 477 aaKnown RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 NUP210LQ5VU65 1888 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 UPK1BO75841 260 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 LALBAP00709 142 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 NAT1P18440 290 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 OR1D4P47884 311 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SLC37A1P57057 533 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ZNF45Q02386 682 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ACSM1Q08AH1 577 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 KLHL26Q53HC5 615 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 SLC35F1Q5T1Q4 408 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ULK3Q6PHR2 472 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 C6orf15Q6UXA7 325 aaPredicted RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 QSOX2Q6ZRP7 698 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 MEPCEQ7L2J0 689 aaKnown RBP9.8□□□□□ -0.84
PKP4-206ENST00000452162 CCDC190Q86UF4 302 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 VASH2Q86V25 355 aa9.8□□□□□ -0.84
PKP4-206ENST00000452162 ZNF321PQ8N8H1 164 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms