RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SEC11CQ9BY50 192 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 C2orf42Q9NWW7 574 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 COMMD9Q9P000 198 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 RHPN2P1A8MT19 583 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 WASH3PC4AMC7 463 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 M0QZ92 97 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 OR2T1O43869 369 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 CATP04040 527 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF14P17017 642 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 ACTR1AP61163 376 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 TAF13Q15543 124 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 TEAD2Q15562 447 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 PCGF3Q3KNV8 242 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 RTP2Q5QGT7 225 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF620Q6ZNG0 422 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 BEND4Q6ZU67 534 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 TMEM169Q96HH4 297 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 RBM14Q96PK6 669 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 OR14A2Q96R54 314 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 MAP3K3Q99759 626 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 KATNBL1Q9H079 304 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 UBQLN3Q9H347 655 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 TCF7L1Q9HCS4 588 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 DZANK1Q9NVP4 752 aa8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 METTL1Q9UBP6 276 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.01
SYNPO2-204ENST00000448416 A0A1B0GV90 55 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 FOXE1O00358 373 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 RBBP9O75884 186 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 ANXA2P07355 339 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 CD63P08962 238 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 GKN3PP0CG01 181 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 IMPA1P29218 277 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 P2RY4P51582 365 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 PLEKHN1Q494U1 663 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF311Q5JNZ3 666 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 GLT8D1Q68CQ7 371 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 FUT10Q6P4F1 479 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 SSX9Q7RTT3 188 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 NKAIN4Q8IVV8 208 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 LNX2Q8N448 690 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF561Q8N587 486 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 GTF3AQ92664 365 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 RAD51AP1Q96B01 352 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC35G5Q96KT7 338 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 HCAR1Q9BXC0 346 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 RNF122Q9H9V4 155 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 INPP5EQ9NRR6 644 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 A0A1W2PPE3 182 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 OR5H14A6NHG9 310 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 NPIPB15A6NHN6 443 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 PHYHO14832 338 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 CLN5O75503 358 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 PRKAG1P54619 331 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 SEPT5Q99719 369 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 EXO5Q9H790 373 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 NRIP3Q9NQ35 241 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 UQCC1Q9NVA1 299 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 FOXJ3Q9UPW0 622 aa8.71□□□□□ -1.02
SYNPO2-204ENST00000448416 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 GPR37O15354 613 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CTSHP09668 335 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CDK2P24941 298 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 SDHAP31040 664 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 EIF2S3P41091 472 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 PSEN2P49810 448 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 RAB2AP61019 212 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF234Q14588 700 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 UNQ6126/PRO20091Q6UXV3 157 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 PRRT2Q7Z6L0 340 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 LRRTM1Q86UE6 522 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 ZNF565Q8N9K5 539 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 OR4C16Q8NGL9 310 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 STOML3Q8TAV4 291 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 ASB13Q8WXK3 278 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 EDEM2Q9BV94 578 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 PCDHB8Q9UN66 801 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 OR2AG2A6NM03 316 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 DLSTP36957 453 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TP53I3Q53FA7 332 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CRTC1Q6UUV9 634 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 DLK2Q6UY11 383 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TMEM200AQ86VY9 491 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 LMNTD1Q8N9Z9 388 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 OR56A3Q8NH54 315 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 EFCAB11Q9BUY7 163 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 TRMT61BQ9BVS5 477 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 CHST6Q9GZX3 395 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 SLC25A18Q9H1K4 315 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 XKR8Q9H6D3 395 aa8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 MRPS30Q9NP92 439 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-204ENST00000448416 C17orf102A2RUQ5 167 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms