RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 WDR34Q96EX3 536 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 FAM118BQ9BPY3 351 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 KCNS3Q9BQ31 491 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PACSIN1Q9BY11 444 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CENPHQ9H3R5 247 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 EHD1Q9H4M9 534 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ZNF385DQ9H6B1 395 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 SLC7A10Q9NS82 523 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PRODH2Q9UF12 536 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 TRAV40A0A0B4J280 105 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 A0A1W2PRB8 838 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 VSTM5A8MXK1 200 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 A8MXK9 166 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PSTPIP1O43586 416 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 TMPRSS11DO60235 418 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ATP1B1P05026 303 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CPMP14384 443 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ME2P23368 584 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CD80P33681 288 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 SFTPDP35247 375 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 SLC1A1P43005 524 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CRADDP78560 199 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 MRPS22P82650 360 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 SMN1Q16637 294 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 MMEL1Q495T6 779 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR52E8Q6IFG1 317 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PPP1R21Q6ZMI0 780 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 RAPH1Q70E73 1250 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 IKBIPQ70UQ0 350 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 MARCH3Q86UD3 253 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 KATNAL2Q8IYT4 538 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 MYO1HQ8N1T3 1032 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 UBE2J2Q8N2K1 259 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PAPD5Q8NDF8 572 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 HIPK4Q8NE63 616 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR4F17Q8NGA8 305 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR4N2Q8NGD1 307 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR52R1Q8NGF1 315 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR10S1Q8NGN2 331 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 APH1AQ96BI3 265 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 FOXRED1Q96CU9 486 aaPredicted RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 VSTM2LQ96N03 204 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 RCHY1Q96PM5 261 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR4F4Q96R69 305 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 HEMGNQ9BXL5 484 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 MRPL37Q9BZE1 423 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 OBP2BQ9NPH6 170 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 MED17Q9NVC6 651 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 BCAP29Q9UHQ4 241 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 HYOU1Q9Y4L1 999 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 LSM4Q9Y4Z0 139 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 COMMD10Q9Y6G5 202 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 KMT2AQ03164 3969 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 A0A0A6YYD5 115 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CTAGE9A4FU28 777 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 POC1B-GALNT4F8VUJ3 575 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 SAP18O00422 153 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 PLPP1O14494 284 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CTAGE8P0CG41 777 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PAX7P23759 505 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PIK3R1P27986 724 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ELK4P28324 431 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 KRT20P35900 424 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 GP5P40197 560 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CRYBB2P43320 205 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PIK3CGP48736 1102 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 RGS4P49798 205 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 XKP51811 444 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 EFNB2P52799 333 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ARFIP1P53367 373 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 SEC24CP53992 1094 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 BPIFB3P59826 476 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PAX2Q02962 417 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 EMX1Q04741 257 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 C17orf67Q0P5P2 114 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 BST1Q10588 318 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 LCP2Q13094 533 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 E2F2Q14209 437 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 PDK3Q15120 406 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 TRIP13Q15645 432 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 TRMT12Q53H54 448 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 OTUD3Q5T2D3 398 aaPredicted RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 KHDRBS2Q5VWX1 349 aaKnown RBP2.71□□□□□ -1.98
PMS1-215ENST00000447232 CLEC6AQ6EIG7 209 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ABLIM2Q6H8Q1 611 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 APOOLQ6UXV4 268 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 GDPGP1Q6ZNW5 385 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 CTAGE4Q8IX94 777 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 GALNT4Q8N4A0 578 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 C11orf44Q8N8P7 122 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 FAM71DQ8N9W8 422 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 OR52E4Q8NGH9 312 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 SLC35G2Q8TBE7 412 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ACTRT2Q8TDY3 377 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 RAB8BQ92930 207 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 R3HDM4Q96D70 268 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 ZG16BQ96DA0 208 aa2.71□□□□□ -1.98
PMS1-215ENST00000447232 KLHDC3Q9BQ90 382 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms