RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 AP4B1Q9Y6B7 739 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 U3KQV3 271 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 RP1L1Q8IWN7 2480 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 ARHGAP21Q5T5U3 1957 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 A0A087WUU8 490 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 A0A0J9YW62 118 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 A0A1W2PRQ8 180 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 A8MVM7 634 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 H0Y3Z8 333 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 ADAMDEC1O15204 470 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 ACTL6AO96019 429 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 LDLRP01130 860 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 FASP25445 335 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 SUCLG1P53597 346 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 SMIM11AP58511 58 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 DGCR6Q14129 220 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 LAPTM4AQ15012 233 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 SEC23BQ15437 767 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 KRTCAP3Q53RY4 240 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 NHSL2Q5HYW2 709 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 TMEM179BQ7Z7N9 219 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 GGNQ86UU5 652 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 MEX3DQ86XN8 651 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR4C15Q8NGM1 316 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 SLC7A13Q8TCU3 470 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 TMEM239Q8WW34 195 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR5B2Q96R09 309 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 FUZQ9BT04 418 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 SEMA6AQ9H2E6 1030 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 REEP1Q9H902 201 aa16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 RALYQ9UKM9 306 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-203ENST00000447216 LINC01387J3KSC0 135 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 EIF1AYO14602 144 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 TNFSF11O14788 317 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ZNF208O43345 1280 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 DEAF1O75398 565 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 BAG2O95816 211 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 LIMS1P48059 325 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 CLDN15P56746 228 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 CLDN18P56856 261 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 C1orf140Q5VVS0 124 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ARHGAP11AQ6P4F7 1023 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 GFRALQ6UXV0 394 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ZNF730Q6ZMV8 503 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR5M9Q8NGP3 310 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 STK35Q8TDR2 534 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 SLC25A43Q8WUT9 341 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ACOT11Q8WXI4 607 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 DDIT4LQ96D03 193 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 KTI12Q96EK9 354 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 WDYHV1Q96HA8 205 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 KLHL15Q96M94 604 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ALPK1Q96QP1 1244 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 TMEM43Q9BTV4 400 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ZNF426Q9BUY5 554 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 ANKRD19PQ9H560 264 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 COQ10BQ9H8M1 238 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 NTN4Q9HB63 628 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 MEPEQ9NQ76 525 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 CAMK2AQ9UQM7 478 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 MED12LQ86YW9 2145 aa16.18■□□□□ 0.18
TRAPPC4-203ENST00000447216 SH3PXD2BA1X283 911 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 NPIPB7O75200 414 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 IMPDH2P12268 514 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 FCGR1AP12314 374 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 ZNF708P17019 499 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 CBLP22681 906 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 RBM34P42696 430 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 RPS5P46782 204 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 MYBPHQ13203 477 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 RCN1Q15293 331 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 CTU2Q2VPK5 515 aaKnown RBP16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 SOWAHCQ53LP3 525 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 NRMQ8IXM6 262 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 TAAR8Q969N4 342 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 SARAFQ96BY9 339 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 HS6ST2Q96MM7 605 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 PTDSS2Q9BVG9 487 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 C20orf141Q9NUB4 165 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 TMCC3Q9ULS5 477 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 MED31Q9Y3C7 131 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 FAM208BQ5VWN6 2430 aa16.17■□□□□ 0.18
TRAPPC4-203ENST00000447216 ENO4A6NNW6 628 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 LRRN3E7EW58 273 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 E2F6O75461 281 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 AHSA1O95433 338 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 EDN3P14138 238 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 PTGS2P35354 604 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 HMGA2P52926 109 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 BCL2A1Q16548 175 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 MBOAT2Q6ZWT7 520 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 PRICKLE2Q7Z3G6 844 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 HS3ST5Q8IZT8 346 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 MEIOBQ8N635 442 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR4K5Q8NGD3 323 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR9Q2Q8NGE9 314 aa16.16■□□□□ 0.18
TRAPPC4-203ENST00000447216 OR2V1Q8NHB1 315 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms