RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 M0R129 80 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 UBBP0CG47 229 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 UBCP0CG48 685 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 ZNF7P17097 686 aaPredicted RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 ACTR1BP42025 376 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 KIR3DL1P43629 444 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 XCR1P46094 333 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 KCNJ3P48549 501 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 CAPZA1P52907 286 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 ACTR1AP61163 376 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 RPS27AP62979 156 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 RAB40BQ12829 278 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 SERTAD2Q14140 314 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 KRT33BQ14525 404 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 HEPACAMQ14CZ8 416 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 UGT8Q16880 541 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 SPDYE7PQ495Y7 208 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 ZNF660Q6AZW8 331 aaPredicted RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 GUSBP11Q6P575 273 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 MOB3CQ70IA8 216 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 LDLRAD3Q86YD5 345 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 LILRA3Q8N6C8 439 aaPredicted RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 CLDN19Q8N6F1 224 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 OR14A16Q8NHC5 309 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 SPPL2AQ8TCT8 520 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 LKAAEAR1Q8TD35 194 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 POLDIP3Q9BY77 421 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 QRSL1Q9H0R6 528 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 OPA3Q9H6K4 179 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 IPPKQ9H8X2 491 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 EXOSC3Q9NQT5 275 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 AKAP7Q9P0M2 348 aaPredicted RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 METTL1Q9UBP6 276 aaKnown RBP12.09□□□□□ -0.47
DDX56-206ENST00000446987 GPR34Q9UPC5 381 aa12.09□□□□□ -0.47
DDX56-206ENST00000446987 SERTM1A2A2V5 107 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 NCF1BA6NI72 391 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 NCF1CA8MVU1 366 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 SNRPGP15A8MWD9 76 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 B4DGG1 531 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 DISC1C4P0D8 188 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 MCIDASD6RGH6 385 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 MANBAO00462 879 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CTDSPLO15194 276 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 PPM1DO15297 605 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 TNFSF14O43557 240 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 FZD7O75084 574 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 ACP1P24666 158 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 PTGFRP43088 359 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 MECP2P51608 486 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 SIM1P81133 766 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 KCNAB1Q14722 419 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CASP12Q6UXS9 341 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 SLC9B2Q86UD5 537 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 L3MBTL4Q8NA19 623 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 ZNF527Q8NB42 609 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 C11orf65Q8NCR3 313 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 NEIL3Q8TAT5 605 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 UBTD2Q8WUN7 234 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 GEMIN6Q8WXD5 167 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 TMEM203Q969S6 136 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CPNE4Q96A23 557 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 LINC00615Q96LM1 132 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 TSNAXQ99598 290 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 CDC6Q99741 560 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CMSS1Q9BQ75 279 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 UTP23Q9BRU9 249 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 ZCCHC2Q9C0B9 1178 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 SLC32A1Q9H598 525 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 MGAT4CQ9UBM8 478 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 RPH3AQ9Y2J0 694 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 PCDHB11Q9Y5F2 797 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 IMPA2O14732 288 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 EEF1E1O43324 174 aaKnown RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 CHST10O43529 356 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CDC123O75794 336 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 TOXO94900 526 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 UBL3O95164 117 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 IL5P05113 134 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 CRYBA1P05813 215 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 ALPPL2P10696 532 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 ATP1B2P14415 290 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 GPX4P36969 197 aaPredicted RBP12.08□□□□□ -0.48
DDX56-206ENST00000446987 ETV5P41161 510 aa12.08□□□□□ -0.48
DDX56-206ENST00000446987 SMSP52788 366 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms