RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ELAVL4P26378 380 aaKnown RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 C16orf58Q96GQ5 468 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 EXO1Q9UQ84 846 aaKnown RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 HEBP2Q9Y5Z4 205 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 RASGEF1AQ8N9B8 481 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ARRDC2Q8TBH0 407 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ST6GALNAC5Q9BVH7 336 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 LRFN1Q9P244 771 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 MT-ND4LP03901 98 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 HCKP08631 526 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 MPPED2Q15777 294 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 LRIF1Q5T3J3 769 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TPRG1Q6ZUI0 275 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZNF550Q7Z398 422 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 EGLN2Q96KS0 407 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 C1QTNF6Q9BXI9 259 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 HEATR5BQ9P2D3 2071 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ASGR2P07307 311 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CBFBQ13951 182 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 RBP7Q96R05 134 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 WDR77Q9BQA1 342 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 FOXE1O00358 373 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 SOX18P35713 384 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CLDN6P56747 220 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 EBPQ15125 230 aaKnown RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 HIST2H3PS2Q5TEC6 136 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 C8orf82Q6P1X6 216 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 LEG1Q6P5S2 330 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OVCH2Q7RTZ1 564 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PHYHIPQ92561 330 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MIB2Q96AX9 1013 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MSLNLQ96KJ4 702 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 COL5A2P05997 1499 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 FAM74A7A6NL05 159 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PRNPP04156 253 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CSF2RBP32927 897 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 FAM74A3Q4VXF1 159 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR4K17Q8NGC6 315 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SFT2D1Q8WV19 159 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MRPS33Q9Y291 106 aaKnown RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 EDN1P05305 212 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PMM1Q92871 262 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 AKR1E2Q96JD6 320 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MRPL17Q9NRX2 175 aaKnown RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 RNF215Q9Y6U7 377 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MEIS3P1A6NDR6 274 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 NME1P15531 152 aaKnown RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 CMPK1P30085 196 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SELENOPP49908 381 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 UBXN2BQ14CS0 331 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ZNF709Q8N972 641 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PNPLA2Q96AD5 504 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MYADMQ96S97 322 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PLEKHA1Q9HB21 404 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SCN1AP35498 2009 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 A0A1B0GTL3 188 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR13C7P0DN81 318 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ACY1Q03154 408 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR2T2Q6IF00 324 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 C5orf46Q6UWT4 87 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 LBX2Q6XYB7 198 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 NUS1Q96E22 293 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ZNF587Q96SQ5 575 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 FAM96BQ9Y3D0 163 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 EGFP01133 1207 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 TMEM71Q6P5X7 295 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR14A16Q8NHC5 309 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PTDSS2Q9BVG9 487 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 TMEM231Q9H6L2 316 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CBY3A6NI87 242 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MEIS3P2A8K0S8 358 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SOCS5O75159 536 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PAPLNO95428 1278 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR11A1Q9GZK7 315 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 COL6A6A6NMZ7 2263 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 RNF4P78317 190 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SCD5Q86SK9 330 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ELOVL3Q9HB03 270 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SLC22A11Q9NSA0 550 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 ZNF30P17039 623 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OPRD1P41143 372 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 LTBQ06643 244 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 TSPAN31Q12999 210 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CMTM4Q8IZR5 234 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MAFFQ9ULX9 164 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 C3P01024 1663 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CACNA1AO00555 2505 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 NPIPA5E9PKD4 350 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 CCKBRP32239 447 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SLC6A9P48067 706 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 TTLL10Q6ZVT0 673 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 REM2Q8IYK8 340 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 SMIM14Q96QK8 99 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 RSRP1Q9BUV0 290 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms