RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 PDZK1Q5T2W1 519 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 ZDHHC24Q6UX98 284 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 LSRQ86X29 649 aaPredicted RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 CKAP2Q8WWK9 683 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 TMEM234Q8WY98 164 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 CCDC106Q9BWC9 280 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 OR11A1Q9GZK7 315 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 LAT2Q9GZY6 243 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 HEATR1Q9H583 2144 aaKnown RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 UNKLQ9H9P5 680 aaKnown RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 SIRT3Q9NTG7 399 aaPredicted RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 ACER3Q9NUN7 267 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 SH3BP4Q9P0V3 963 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 CRNNQ9UBG3 495 aaPredicted RBP12.03□□□□□ -0.48
LINC00642-202ENST00000442515 CHRNA9Q9UGM1 479 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 HDGFL3Q9Y3E1 203 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 PPIAL4AQ9Y536 164 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 PTGDR2Q9Y5Y4 395 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 KCNE3Q9Y6H6 103 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 NBEAL2Q6ZNJ1 2754 aa12.03□□□□□ -0.48
LINC00642-202ENST00000442515 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 ADRA2CP18825 462 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 TAC1P20366 129 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 OR2B6P58173 313 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 UBE2NP61088 152 aaKnown RBP12.02□□□□□ -0.49
LINC00642-202ENST00000442515 TUBA1BP68363 451 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 TUBA4AP68366 448 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 H3F3AP84243 136 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 TRIM46Q7Z4K8 759 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 ANKRD27Q96NW4 1050 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 REEP4Q9H6H4 257 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 ACSS3Q9H6R3 686 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 CTPS2Q9NRF8 586 aa12.02□□□□□ -0.49
LINC00642-202ENST00000442515 CENPVL1A0A0U1RR11 272 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 TBX19O60806 448 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 LGI1O95970 557 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 INHBAP08476 426 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 CELA3BP08861 270 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 UBTFL6P0CB48 400 aaPredicted RBP12.01□□□□□ -0.49
LINC00642-202ENST00000442515 IMPDH1P20839 514 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 ACHEP22303 614 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 APOBEC1P41238 236 aaKnown RBP12.01□□□□□ -0.49
LINC00642-202ENST00000442515 PAFAH1B1P43034 410 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 CAV1Q03135 178 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 PDE7AQ13946 482 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 SLC17A1Q14916 467 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
LINC00642-202ENST00000442515 POMGNT2Q8NAT1 580 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 ADAMTS15Q8TE58 950 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 TMEM45BQ96B21 275 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 ACTRT3Q9BYD9 372 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 TMPRSS13Q9BYE2 586 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 MID1IP1Q9NPA3 183 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 TMEM45AQ9NWC5 275 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 SAR1BQ9Y6B6 198 aa12.01□□□□□ -0.49
LINC00642-202ENST00000442515 ARPC4-TTLL3A0A0A6YYG9 625 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 VSTM5A8MXK1 200 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 NR5A2O00482 541 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 ANKRD28O15084 1053 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 SKAP2O75563 359 aaPredicted RBP12□□□□□ -0.49
LINC00642-202ENST00000442515 IGKV3-15P01624 115 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 HPXP02790 462 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 PAX7P23759 505 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 COL8A2P25067 703 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 PRKAA2P54646 552 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 LMO4P61968 165 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 POU3F1Q03052 451 aaPredicted RBP12□□□□□ -0.49
LINC00642-202ENST00000442515 TP53BP2Q13625 1128 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 C17orf53Q8N3J3 647 aaPredicted RBP12□□□□□ -0.49
LINC00642-202ENST00000442515 CLHC1Q8NHS4 586 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 ZNF385AQ96PM9 386 aaKnown RBP12□□□□□ -0.49
LINC00642-202ENST00000442515 TSSK3Q96PN8 268 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
LINC00642-202ENST00000442515 CCT7Q99832 543 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 C1QTNF5Q9BXJ0 243 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 GSTO2Q9H4Y5 243 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 SLC52A3Q9NQ40 469 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 GPATCH2Q9NW75 528 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 MED29Q9NX70 200 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 TMEM181Q9P2C4 612 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 KCNE5Q9UJ90 142 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
LINC00642-202ENST00000442515 A0A096LPE4 126 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 A0A0G2JMP0 313 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 A0A0X1KG70 313 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 A0A1W2PPZ6 126 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 OR6C65A6NJZ3 312 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 TRIM49D1C9J1S8 452 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 EIF1BO60739 113 aaKnown RBP11.99□□□□□ -0.49
LINC00642-202ENST00000442515 SEC22BO75396 215 aa11.99□□□□□ -0.49
LINC00642-202ENST00000442515 URI1O94763 535 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms