RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SDR9C7Q8NEX9 313 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 OR5J2Q8NH18 312 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 SMAP2Q8WU79 429 aaPredicted RBP17.06■□□□□ 0.32
CLK1-205ENST00000434813 CNN2Q99439 309 aaKnown RBP17.06■□□□□ 0.32
CLK1-205ENST00000434813 MAP3K3Q99759 626 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 WDR70Q9NW82 654 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 ERVK-19Q9WJR5 959 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 A0A0G2JK05 382 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 CSTAP01040 98 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 TFP02787 698 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 HLA-DMAP28067 261 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 RBMS1P29558 406 aaKnown RBP17.06■□□□□ 0.32
CLK1-205ENST00000434813 GABRA4P48169 554 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 ACTA2P62736 377 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 ACTG2P63267 376 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 BTG2P78543 158 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 NNATQ16517 81 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 RPTNQ6XPR3 784 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 SYS1Q8N2H4 156 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 MS4A15Q8N5U1 240 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 RFLNBQ8N5W9 214 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 FAM98AQ8NCA5 519 aaKnown RBP17.06■□□□□ 0.32
CLK1-205ENST00000434813 OR4K13Q8NH42 304 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 TPSD1Q9BZJ3 242 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 OR10A5Q9H207 317 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 C2orf42Q9NWW7 574 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 LRIT1Q9P2V4 623 aa17.06■□□□□ 0.32
CLK1-205ENST00000434813 A8MV72 311 aaPredicted RBP17.05■□□□□ 0.32
CLK1-205ENST00000434813 MCIDASD6RGH6 385 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 PPM1BO75688 479 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 OR2T7P0C7T2 308 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 MAOAP21397 527 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 PYCR1P32322 319 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 TALDO1P37837 337 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 HSD17B7P56937 341 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 ERV3-1Q14264 604 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 NDUFAF6Q330K2 333 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 ZNF615Q8N8J6 731 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 OR2T27Q8NH04 317 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
CLK1-205ENST00000434813 SHDQ96IW2 340 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 UCK1Q9HA47 277 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 ENAMQ9NRM1 1142 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 RASD1Q9Y272 281 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 OR10H1Q9Y4A9 318 aa17.05■□□□□ 0.32
CLK1-205ENST00000434813 A0A0G2JMP0 313 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 A0A0X1KG70 313 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 LILRA5A6NI73 299 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 GNB5O14775 395 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 PROS1P07225 676 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 PSKH1P11801 424 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 INPP1P49441 399 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 PGDP52209 483 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 DPY19L2P2Q6ZN68 376 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ZNF440Q8IYI8 595 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ARL14Q8N4G2 192 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 OR4M2Q8NGB6 313 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 OR4C3Q8NH37 302 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLK1-205ENST00000434813 NUFIP1Q9UHK0 495 aaKnown RBP17.04■□□□□ 0.32
CLK1-205ENST00000434813 IER3IP1Q9Y5U9 82 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 COL6A3P12111 3177 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 FAM240BA0A1B0GVZ2 78 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 CENPXA8MT69 81 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ARPC3O15145 178 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 SERPINA3P01011 423 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 CLPSP04118 112 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 EIF4EP06730 217 aaKnown RBP17.04■□□□□ 0.32
CLK1-205ENST00000434813 GALNSP34059 522 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ACVR1BP36896 505 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 CLDN20P56880 219 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 OR10A3P58181 314 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 RPS4XP62701 263 aaKnown RBP17.04■□□□□ 0.32
CLK1-205ENST00000434813 TATDN3Q17R31 274 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ISXQ2M1V0 245 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 ACSM3Q53FZ2 586 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 FAM71CQ8NEG0 241 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 OR4M1Q8NGD0 313 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 GHSRQ92847 366 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 C3orf49Q96BT1 292 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 SMIM19Q96E16 107 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 CCNL2Q96S94 520 aaPredicted RBP17.04■□□□□ 0.32
CLK1-205ENST00000434813 PELOQ9BRX2 385 aaKnown RBP17.04■□□□□ 0.32
CLK1-205ENST00000434813 SLC19A3Q9BZV2 496 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 PLCL2Q9UPR0 1127 aa17.04■□□□□ 0.32
CLK1-205ENST00000434813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 FAM172BPA6NC97 362 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 OGG1O15527 345 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 TRIM3O75382 744 aaPredicted RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 NPR2P20594 1047 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 LGALS3BPQ08380 585 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 CDK5R1Q15078 307 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 ELOCQ15369 112 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 NDUFA5Q16718 116 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 CDONQ4KMG0 1287 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 PAMR1Q6UXH9 720 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 IL20RBQ6UXL0 311 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 SLC35F2Q8IXU6 374 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms