RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 BCL2L11O43521 198 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 UGT1A9O60656 530 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 LYPLA1O75608 230 aaPredicted RBP4.53□□□□□ -1.68
USP54-206ENST00000433394 SLITRK3O94933 977 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 TSPAN12O95859 305 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SLC2A3P11169 496 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 CCR1P32246 355 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 MAP3K8P41279 467 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 HSPA2P54652 639 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 RIPK4P57078 832 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 OGDHQ02218 1023 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 C1orf61Q13536 156 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 LRRC36Q1X8D7 754 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 PDZK1Q5T2W1 519 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 WDR74Q6RFH5 385 aaPredicted RBP4.53□□□□□ -1.68
USP54-206ENST00000433394 ZBED8Q8IZ13 594 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SVOPLQ8N434 492 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 OR13F1Q8NGS4 319 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 TYMSOSQ8TAI1 123 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 GTSF1Q8WW33 167 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 UBE2E3Q969T4 207 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SLC38A2Q96QD8 506 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 SMIM14Q96QK8 99 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 CHIAQ9BZP6 476 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 IKZF5Q9H5V7 419 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 PTGES2Q9H7Z7 377 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 ZNF275Q9NSD4 429 aaPredicted RBP4.53□□□□□ -1.68
USP54-206ENST00000433394 USP16Q9Y5T5 823 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 TROQ12816 1431 aaPredicted RBP4.53□□□□□ -1.68
USP54-206ENST00000433394 MIA2Q96PC5 1412 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 RRBP1Q9P2E9 1410 aaKnown RBP4.53□□□□□ -1.68
USP54-206ENST00000433394 HCFC1P51610 2035 aa4.53□□□□□ -1.68
USP54-206ENST00000433394 ARHGEF11O15085 1522 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 KDM5BQ9UGL1 1544 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 A0A1B0GVL5 298 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 AP3B1O00203 1094 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 TNFSF11O14788 317 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SERF1AO75920 110 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SERPINA3P01011 423 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 CALCRP30988 508 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 STARP49675 285 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SLC15A2Q16348 729 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 PRR4Q16378 134 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 AANATQ16613 207 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SKA3Q8IX90 412 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SCFD1Q8WVM8 642 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 ARNTL2Q8WYA1 636 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 NEIL2Q969S2 332 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 C10orf35Q96D05 121 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 GAL3ST1Q99999 423 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 PYGO2Q9BRQ0 406 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 SRXN1Q9BYN0 137 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 Q9H3A6 140 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 REEP4Q9H6H4 257 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 NMRK1Q9NWW6 199 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 B3GNT2Q9NY97 397 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 CTNNA3Q9UI47 895 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 RPL36Q9Y3U8 105 aaKnown RBP4.52□□□□□ -1.69
USP54-206ENST00000433394 LRRIQ1Q96JM4 1722 aa4.52□□□□□ -1.69
USP54-206ENST00000433394 ARAP3Q8WWN8 1544 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 PLB1Q6P1J6 1458 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 KIF14Q15058 1648 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 A0A1B0GUS0 222 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 CCDC182A6NF36 153 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 FRG2CA6NGY1 282 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 OR52A4PA6NMU1 304 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 OR8U8P0C7N1 319 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 PCMT1P22061 227 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 GATA2P23769 480 aaPredicted RBP4.51□□□□□ -1.69
USP54-206ENST00000433394 IL12AP29459 219 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 RFC4P35249 363 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 GYG1P46976 350 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 OR3A4PP47883 348 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 MEOX2P50222 304 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 ATP1B3P54709 279 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 KIAA0040Q15053 153 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 PPP1R7Q15435 360 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 PRAMEF5Q5TYX0 476 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 RSBN1Q5VWQ0 802 aaPredicted RBP4.51□□□□□ -1.69
USP54-206ENST00000433394 PRAMEF6Q5VXH4 476 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 CGB2Q6NT52 195 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 PPP1R27Q86WC6 154 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 HPS6Q86YV9 775 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 ZNF100Q8IYN0 542 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 CEP112Q8N8E3 955 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 OR8J1Q8NGP2 316 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 AKR7LQ8NHP1 331 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 ST8SIA1Q92185 356 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 STMN2Q93045 179 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 NPY6RQ99463 290 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 RIOK1Q9BRS2 568 aaKnown RBP4.51□□□□□ -1.69
USP54-206ENST00000433394 RBKSQ9H477 322 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 ETNK2Q9NVF9 386 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 DCAF16Q9NXF7 216 aa4.51□□□□□ -1.69
USP54-206ENST00000433394 ZNF107Q9UII5 783 aaPredicted RBP4.51□□□□□ -1.69
USP54-206ENST00000433394 ANGPTL2Q9UKU9 493 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms