RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 GRINAQ7Z429 371 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 ZNF525Q8N782 197 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 ANKRD42Q8N9B4 389 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.44e-8■■■■■ 36.3
SMARCE1-205ENST00000431889 NEURL3Q96EH8 262 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 RADILQ96JH8 1075 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 EMC3Q9P0I2 261 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 OSGIN1Q9UJX0 560 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 SLC35A3Q9Y2D2 325 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.4
SMARCE1-205ENST00000431889 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 CCDC154A6NI56 674 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 E9PBE3 544 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 PMS2P2O95744 297 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 LBPP18428 481 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 CD40P25942 277 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 STX3Q13277 289 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 GABRA6Q16445 453 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 TSPO2Q5TGU0 170 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 ANXA8L1Q5VT79 327 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 VRK2Q86Y07 508 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 WDR31Q8NA23 367 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 MGARPQ8TDB4 240 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 ZHX1-C8orf76Q96EF9 292 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 PANX1Q96RD7 426 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 SAP130Q9H0E3 1048 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC38A1Q9H2H9 487 aa12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-205ENST00000431889 YLPM1P49750 1951 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 AKR7A3O95154 331 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 EPHA3P29320 983 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 TTKP33981 857 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 MAGEA8P43361 318 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 BST1Q10588 318 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 CEACAM7Q14002 265 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 OR7A5Q15622 319 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 RPS26P11Q5JNZ5 115 aaPredicted RBP12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 MRPL2Q5T653 305 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 AGAP6Q5VW22 663 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 C11orf71Q6IPW1 123 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 GPAT4Q86UL3 456 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 MUC15Q8N387 334 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 VPS37AQ8NEZ2 397 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 PIGXQ8TBF5 258 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 WDR60Q8WVS4 1066 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 TESCQ96BS2 214 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 RHNO1Q9BSD3 238 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 TAS2R16Q9NYV7 291 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
SMARCE1-205ENST00000431889 SDHDO14521 159 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 CD5LO43866 347 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 TMCC2O75069 709 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 AGR2O95994 175 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 THBS1P07996 1170 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 NR2F1P10589 423 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 IL7RP16871 459 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 TUBA1BP68363 451 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 TUBA4AP68366 448 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 SRSF2Q01130 221 aaKnown RBP12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 MAPK11Q15759 364 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 GTDC1Q4AE62 458 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 TUBA1AQ71U36 451 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 CADM2Q8N3J6 435 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 CCDC115Q96NT0 180 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 OR52E6Q96RD3 313 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 HDGFL3Q9Y3E1 203 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 FLVCR1Q9Y5Y0 555 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 PLCE1Q9P212 2302 aa12.5□□□□□ -0.41
SMARCE1-205ENST00000431889 COL6A5A8TX70 2615 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 AGAP5A6NIR3 686 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 ATP6V1G2-DDX39BF2Z307 99 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 DHRS4L1P0CG22 281 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 PRG2P13727 222 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 ETFAP13804 333 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 POLR2HP52434 150 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 HOXC5Q00444 222 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 ETFDHQ16134 617 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 SMU1Q2TAY7 513 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 NXNQ6DKJ4 435 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 FBXL14Q8N1E6 418 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 AURKBQ96GD4 344 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 MUS81Q96NY9 551 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 DHRS9Q9BPW9 319 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 PARD6BQ9BYG5 372 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms